Basic Information | |
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Species | Glycine max |
Cazyme ID | Glyma04g00610.2 |
Family | GH10 |
Protein Properties | Length: 455 Molecular Weight: 52024.8 Isoelectric Point: 6.2778 |
Chromosome | Chromosome/Scaffold: 04 Start: 354292 End: 357709 |
Description | Glycosyl hydrolase family 10 protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH10 | 110 | 386 | 0 |
SKDFPFGSAIAKTILGNLPYQNWFVKRFNAAVFENELKWYATEPDEGKVNYTISDQMLQFVRTNNIIARGHNIFWENPKYTPPWVLNLTGTKLQSAVNSR IHSLMSQYKDEFIHWDVSNEMLHFNFYEERLGPDATLHFFETAHESDPLATLFMNDFNVVETCSDVKSTVDAYISRVRELQRNGIFMDGIGLEGHFTIPN PPLIRAILDKLATLGLPIWLTEVDISKTLDRDAQANYLEEVLREGFSHPSVNGIMLWTAFHPNGCYQMCLTDNNFKN |
Full Sequence |
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Protein Sequence Length: 455 Download |
MVRTTLETEK ETHDCIGTVS AKHECWSFLK GGFVLNWSSN LSMIFFQNAD GKDINIDVAS 60 PSLQPFTKQQ WRINQQYKIN TQRKRAVTIH VSDSNGRRFQ GASICIEQIS KDFPFGSAIA 120 KTILGNLPYQ NWFVKRFNAA VFENELKWYA TEPDEGKVNY TISDQMLQFV RTNNIIARGH 180 NIFWENPKYT PPWVLNLTGT KLQSAVNSRI HSLMSQYKDE FIHWDVSNEM LHFNFYEERL 240 GPDATLHFFE TAHESDPLAT LFMNDFNVVE TCSDVKSTVD AYISRVRELQ RNGIFMDGIG 300 LEGHFTIPNP PLIRAILDKL ATLGLPIWLT EVDISKTLDR DAQANYLEEV LREGFSHPSV 360 NGIMLWTAFH PNGCYQMCLT DNNFKNLPAG DVVDKLVEEW QISRVEGVTD VHGSYSFYGF 420 LGEYRISVKY GNKTTKSTFS LSRGDETRHF TITI* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG3693 | XynA | 3.0e-42 | 108 | 366 | 282 | + Beta-1,4-xylanase [Carbohydrate transport and metabolism] | ||
pfam00331 | Glyco_hydro_10 | 2.0e-67 | 107 | 366 | 276 | + Glycosyl hydrolase family 10. | ||
smart00633 | Glyco_10 | 1.0e-81 | 146 | 393 | 269 | + Glycosyl hydrolase family 10. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ABF94922.1 | 0 | 1 | 454 | 17 | 470 | Glycosyl hydrolase family 10 protein, expressed [Oryza sativa (japonica cultivar-group)] |
EMBL | CBI37893.1 | 0 | 2 | 454 | 173 | 625 | unnamed protein product [Vitis vinifera] |
RefSeq | NP_195577.2 | 0 | 2 | 454 | 108 | 562 | glycosyl hydrolase family 10 protein [Arabidopsis thaliana] |
RefSeq | XP_002277675.1 | 0 | 2 | 454 | 97 | 549 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002534153.1 | 0 | 1 | 454 | 20 | 473 | Endo-1,4-beta-xylanase A precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1v6y_A | 2e-30 | 115 | 366 | 16 | 275 | A Chain A, Crystal Structure Of Chimeric Xylanase Between Streptomyces Olivaceoviridis E-86 Fxyn And Cellulomonas Fimi Cex |
PDB | 2g4f_B | 3e-30 | 115 | 366 | 16 | 266 | A Chain A, Crystal Structure Of Chimeric Xylanase Between Streptomyces Olivaceoviridis E-86 Fxyn And Cellulomonas Fimi Cex |
PDB | 2g4f_A | 3e-30 | 115 | 366 | 16 | 266 | A Chain A, Crystal Structure Of Chimeric Xylanase Between Streptomyces Olivaceoviridis E-86 Fxyn And Cellulomonas Fimi Cex |
PDB | 2g3j_A | 3e-30 | 115 | 366 | 16 | 266 | A Chain A, Crystal Structure Of Chimeric Xylanase Between Streptomyces Olivaceoviridis E-86 Fxyn And Cellulomonas Fimi Cex |
PDB | 2g3i_A | 3e-30 | 115 | 366 | 16 | 266 | A Chain A, Structure Of S.Olivaceoviridis Xylanase Q88aR275A MUTANT |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
(1,4)-β-xylan degradation | 3.2.1.8-RXN | EC-3.2.1.8 | endo-1,4-β-xylanase |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
CX705541 | 238 | 218 | 455 | 0 |
ES803339 | 253 | 100 | 352 | 0 |
GR953916 | 292 | 89 | 380 | 0 |
DY024035 | 263 | 169 | 428 | 0 |
EL361489 | 267 | 151 | 416 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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