Basic Information | |
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Species | Glycine max |
Cazyme ID | Glyma04g08881.2 |
Family | GT47 |
Protein Properties | Length: 474 Molecular Weight: 54151.4 Isoelectric Point: 9.3698 |
Chromosome | Chromosome/Scaffold: 04 Start: 6984311 End: 6987928 |
Description | Exostosin family protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT47 | 143 | 424 | 0 |
NMLKVYIYQDGDRPIFHEPLLDGIYASEGWFMKLMEANKQFVTRDPGKAHLFYIPFSSRLLQQTLYVRNSHRRSNLIEYMKNYVDMIAGKYPFWNRTSGA DHFVVACHDWAPAETRGRMLSCIRALCNADIEVGFKIGKDVSLPETYIRSSENPVKNIGGDPPSKRPILAFFAGGLHGYVRPILLKHWENKEPDMKISGP LPHVRGNVNYIQLMKSSKFCICARGHEVNSPRVVEAIFHECIPVIISDNFIPPFFEILNWESFAVFVKEEEIPNLRNILLSI |
Full Sequence |
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Protein Sequence Length: 474 Download |
MVPLPNRTSL DSETDSRSPV VSVTSAATSV KSNTDPVYKD GNSGSLPGNS NLTSNNVKPV 60 TAKNSKKRPS KVVSISEMNL LLQHNHASSK LAKPARASAV DLEILHAQSE ILNAPLIMND 120 PRLYPPLYRN VSMFRRSYEL MENMLKVYIY QDGDRPIFHE PLLDGIYASE GWFMKLMEAN 180 KQFVTRDPGK AHLFYIPFSS RLLQQTLYVR NSHRRSNLIE YMKNYVDMIA GKYPFWNRTS 240 GADHFVVACH DWAPAETRGR MLSCIRALCN ADIEVGFKIG KDVSLPETYI RSSENPVKNI 300 GGDPPSKRPI LAFFAGGLHG YVRPILLKHW ENKEPDMKIS GPLPHVRGNV NYIQLMKSSK 360 FCICARGHEV NSPRVVEAIF HECIPVIISD NFIPPFFEIL NWESFAVFVK EEEIPNLRNI 420 LLSISEERYL EMHKRAKKVQ EHFLWHAEPV KYDLFHMLLH SIWYNRLFHI SRT* 480 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam03016 | Exostosin | 1.0e-69 | 145 | 424 | 301 | + Exostosin family. The EXT family is a family of tumour suppressor genes. Mutations of EXT1 on 8q24.1, EXT2 on 11p11-13, and EXT3 on 19p have been associated with the autosomal dominant disorder known as hereditary multiple exostoses (HME). This is the most common known skeletal dysplasia. The chromosomal locations of other EXT genes suggest association with other forms of neoplasia. EXT1 and EXT2 have both been shown to encode a heparan sulphate polymerase with both D-glucuronyl (GlcA) and N-acetyl-D-glucosaminoglycan (GlcNAC) transferase activities. The nature of the defect in heparan sulphate biosynthesis in HME is unclear. |
Gene Ontology | |
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GO Term | Description |
GO:0016020 | membrane |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
RefSeq | XP_002281263.1 | 0 | 51 | 470 | 244 | 666 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002309546.1 | 0 | 41 | 470 | 2 | 414 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002309547.1 | 0 | 10 | 471 | 1 | 469 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002324801.1 | 0 | 78 | 470 | 1 | 395 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002516500.1 | 0 | 69 | 469 | 52 | 452 | catalytic, putative [Ricinus communis] |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
xylogalacturonan biosynthesis | RXN-9589 | EC-2.4.2.41 | xylogalacturonan β-1,3-xylosyltransferase |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
ES808098 | 342 | 110 | 451 | 0 |
JG631016 | 286 | 171 | 455 | 0 |
FG993651 | 210 | 265 | 474 | 0 |
GO247950 | 259 | 150 | 408 | 0 |
GO247950 | 37 | 113 | 149 | 0.00000003 |
Sequence Alignments (This image is cropped. Click for full image.) |
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