| Basic Information | |
|---|---|
| Species | Glycine max |
| Cazyme ID | Glyma04g12220.2 |
| Family | GT4 |
| Protein Properties | Length: 722 Molecular Weight: 81707.8 Isoelectric Point: 6.9856 |
| Chromosome | Chromosome/Scaffold: 04 Start: 11196686 End: 11201476 |
| Description | Sucrose-phosphate synthase family protein |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GT4 | 213 | 361 | 2e-30 |
| TNPHKPTILALSYPDPKKNVMNLLKAFGECQTLRKLANSTLILGNRDDIEEMSNNSSVVLTMVLKLIDKYDLYGSFINPTLMEPFGLTLIEAVAYGLPVV ATKNGGPVDILKSIHSQALNNGLLIDPHDHKSIEEALLKLVADKNLWLE | |||
| Full Sequence |
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| Protein Sequence Length: 722 Download |
| MESLLRCCHA PLMAVTVGKH TSFVFHVDIV ISTYQKNHFG LTCLNLWMAL SHIVNMARVL 60 GEQVNGGKPT WPYVIPGHYA DAGEVAAHLS GALNVPMVLS GHSLGRNKFE QLLMQGRLSR 120 EAINATYKIM RRIEAEELGV DATEMVVTST RQEIEEQWGL YDGFDLKLER KLRVRRRRRV 180 SCLGRHMSRM VVIPPGMDFS YATTQDSIMR FFTNPHKPTI LALSYPDPKK NVMNLLKAFG 240 ECQTLRKLAN STLILGNRDD IEEMSNNSSV VLTMVLKLID KYDLYGSFIN PTLMEPFGLT 300 LIEAVAYGLP VVATKNGGPV DILKSIHSQA LNNGLLIDPH DHKSIEEALL KLVADKNLWL 360 ECRKNGLKSI HRFSWPEHCR NYLSHVEFST EGDSKLNGEM DPVARQKQII EAIMCRVSST 420 GNSNANCYFP GRRQRLVMVA ADCYDSDGNI AEEAFQAVVI NVMKVVRPGI RSGRVGVMLQ 480 TGLSFQETIE ALNNFQVNME EFDVVVCNGG SEMYYPWKDL MAYTDYEAYA EYAWPGENIR 540 STIPRFAKVD DGEENDIVEY ASACSSRCYS YSVKPGAMIQ KIDELRQRLR MRGLRCNLVY 600 THAGLRLNVI PLFASRKQAL RYLSVKWGID LSKVVVFVGE KGDTDYEELV SDIQKTLVLK 660 GAVEYGSERL LRSEESYKRE DVLSQDSPNI IYAEKSYEDC VIFQQFWSIS KYHDFCFGNY 720 F* 780 |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| cd03809 | GT1_mtfB_like | 4.0e-23 | 188 | 383 | 210 | + This family is most closely related to the GT1 family of glycosyltransferases. mtfB (mannosyltransferase B) in E. coli has been shown to direct the growth of the O9-specific polysaccharide chain. It transfers two mannoses into the position 3 of the previously synthesized polysaccharide. | ||
| cd03801 | GT1_YqgM_like | 7.0e-27 | 78 | 387 | 326 | + This family is most closely related to the GT1 family of glycosyltransferases and named after YqgM in Bacillus licheniformis about which little is known. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found mainly in certain bacteria and archaea. | ||
| cd03800 | GT1_Sucrose_synthase | 7.0e-91 | 71 | 384 | 334 | + This family is most closely related to the GT1 family of glycosyltransferases. The sucrose-phosphate synthases in this family may be unique to plants and photosynthetic bacteria. This enzyme catalyzes the synthesis of sucrose 6-phosphate from fructose 6-phosphate and uridine 5'-diphosphate-glucose, a key regulatory step of sucrose metabolism. The activity of this enzyme is regulated by phosphorylation and moderated by the concentration of various metabolites and light. | ||
| TIGR02472 | sucr_P_syn_N | 7.0e-93 | 46 | 387 | 379 | + sucrose-phosphate synthase, putative, glycosyltransferase domain. This family consists of the N-terminal regions, or in some cases the entirety, of bacterial proteins closely related to plant sucrose-phosphate synthases (SPS). The C-terminal domain (TIGR02471), found with most members of this family, resembles both bona fide plant sucrose-phosphate phosphatases (SPP) and the SPP-like domain of plant SPS. At least two members of this family lack the SPP-like domain, which may have binding or regulatory rather than enzymatic activity by analogy to plant SPS. This enzyme produces sucrose 6-phosphate and UDP from UDP-glucose and D-fructose 6-phosphate, and may be encoded near the gene for fructokinase. | ||
| TIGR02468 | sucrsPsyn_pln | 0 | 49 | 699 | 764 | + sucrose phosphate synthase/possible sucrose phosphate phosphatase, plant. Members of this family are sucrose-phosphate synthases of plants. This enzyme is known to exist in multigene families in several species of both monocots and dicots. The N-terminal domain is the glucosyltransferase domain. Members of this family also have a variable linker region and a C-terminal domain that resembles sucrose phosphate phosphatase (SPP) (EC 3.1.3.24) (see TIGR01485), the next and final enzyme of sucrose biosynthesis. The SPP-like domain likely serves a binding and not a catalytic function, as the reported SPP is always encoded by a distinct protein. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0009058 | biosynthetic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| DDBJ | BAD93789.1 | 0 | 49 | 696 | 44 | 771 | sucrose-phosphate synthase - like protein [Arabidopsis thaliana] |
| EMBL | CBI17025.1 | 0 | 49 | 698 | 278 | 1004 | unnamed protein product [Vitis vinifera] |
| RefSeq | XP_002270813.1 | 0 | 49 | 698 | 303 | 1029 | PREDICTED: sucrose-phosphate synthase 1 [Vitis vinifera] |
| RefSeq | XP_002319320.1 | 0 | 49 | 698 | 279 | 1006 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002521744.1 | 0 | 49 | 698 | 280 | 1007 | sucrose phosphate syntase, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 2r68_A | 2e-28 | 46 | 387 | 99 | 457 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
| PDB | 2r66_A | 2e-28 | 46 | 387 | 99 | 457 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
| PDB | 2r60_A | 2e-28 | 46 | 387 | 99 | 457 | A Chain A, Structure Of Apo Sucrose Phosphate Synthase (Sps) Of Halothermothrix Orenii |
| PDB | 3s29_H | 4e-20 | 41 | 384 | 380 | 764 | A Chain A, Structure Of Apo Sucrose Phosphate Synthase (Sps) Of Halothermothrix Orenii |
| PDB | 3s29_G | 4e-20 | 41 | 384 | 380 | 764 | A Chain A, Structure Of Apo Sucrose Phosphate Synthase (Sps) Of Halothermothrix Orenii |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| sucrose biosynthesis | SUCROSE-PHOSPHATE-SYNTHASE-RXN | EC-2.4.1.14 | sucrose-phosphate synthase |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| HO804028 | 455 | 297 | 717 | 0 |
| HO789321 | 293 | 410 | 702 | 0 |
| HO796578 | 272 | 49 | 291 | 0 |
| HO796578 | 79 | 286 | 364 | 0 |
| HO796578 | 14 | 373 | 386 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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