| Basic Information | |
|---|---|
| Species | Glycine max |
| Cazyme ID | Glyma04g13613.1 |
| Family | CE8 |
| Protein Properties | Length: 217 Molecular Weight: 24481.1 Isoelectric Point: 10.4079 |
| Chromosome | Chromosome/Scaffold: 04 Start: 13295193 End: 13297960 |
| Description | Plant invertase/pectin methylesterase inhibitor superfamily |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| CE8 | 25 | 216 | 0 |
| VGSGNFKTVQDAVNAAAKRKLKMRFVIHVKKGVYRENIDVAVHNDNIMLVGDGLRNTITTSGRSFQDGYTTYSSATAGIDGLHFIARDITFQNIVGPHKG QVVALRSESDLFVFYRCAIIGYQDTFMAHAQRQFYRPCYIYGTMDFIFGNSAVVFQNCYIVARKPLDGQANMITAQGRGDPFQNTRISIHNS | |||
| Full Sequence |
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| Protein Sequence Length: 217 Download |
| MRKHGSTLLS RTFKRVLRHM LWWQVGSGNF KTVQDAVNAA AKRKLKMRFV IHVKKGVYRE 60 NIDVAVHNDN IMLVGDGLRN TITTSGRSFQ DGYTTYSSAT AGIDGLHFIA RDITFQNIVG 120 PHKGQVVALR SESDLFVFYR CAIIGYQDTF MAHAQRQFYR PCYIYGTMDF IFGNSAVVFQ 180 NCYIVARKPL DGQANMITAQ GRGDPFQNTR ISIHNS* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02201 | PLN02201 | 7.0e-79 | 26 | 216 | 191 | + probable pectinesterase/pectinesterase inhibitor | ||
| PLN02916 | PLN02916 | 5.0e-79 | 24 | 216 | 195 | + pectinesterase family protein | ||
| PLN02301 | PLN02301 | 1.0e-83 | 26 | 215 | 190 | + pectinesterase/pectinesterase inhibitor | ||
| PLN02995 | PLN02995 | 2.0e-102 | 7 | 216 | 215 | + Probable pectinesterase/pectinesterase inhibitor | ||
| pfam01095 | Pectinesterase | 9.0e-103 | 26 | 216 | 191 | + Pectinesterase. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005618 | cell wall |
| GO:0030599 | pectinesterase activity |
| GO:0042545 | cell wall modification |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| RefSeq | NP_199962.1 | 0 | 7 | 216 | 205 | 419 | pectinesterase family protein [Arabidopsis thaliana] |
| RefSeq | NP_199963.1 | 0 | 7 | 216 | 207 | 423 | pectinesterase family protein [Arabidopsis thaliana] |
| RefSeq | XP_002318284.1 | 0 | 26 | 216 | 220 | 410 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002322402.1 | 0 | 26 | 216 | 218 | 408 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002510939.1 | 0 | 24 | 216 | 218 | 410 | Pectinesterase-2 precursor, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1gq8_A | 0 | 26 | 216 | 15 | 204 | A Chain A, Pectin Methylesterase From Carrot |
| PDB | 1xg2_A | 0 | 24 | 214 | 9 | 198 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 2ntq_B | 0.0000000000002 | 30 | 187 | 18 | 193 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 2ntq_A | 0.0000000000002 | 30 | 187 | 18 | 193 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 2ntp_B | 0.0000000000002 | 30 | 187 | 18 | 193 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| homogalacturonan degradation | RXN-2102 | EC-3.1.1.11 | pectinesterase |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
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| Hit | Length | Start | End | EValue |
| CA851330 | 193 | 24 | 216 | 0 |
| FG578767 | 182 | 36 | 216 | 0 |
| GO031971 | 164 | 15 | 178 | 0 |
| GT239390 | 192 | 24 | 215 | 0 |
| ES980554 | 181 | 3 | 182 | 0 |
| Orthologous Group | |||||
|---|---|---|---|---|---|
| Species | ID | ||||
| Malus domestica | MDP0000226941 | MDP0000131899 | |||
| Sequence Alignments (This image is cropped. Click for full image.) |
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| Phylogeny |
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