Basic Information | |
---|---|
Species | Glycine max |
Cazyme ID | Glyma04g41370.1 |
Family | GT5 |
Protein Properties | Length: 652 Molecular Weight: 72396.8 Isoelectric Point: 5.207 |
Chromosome | Chromosome/Scaffold: 04 Start: 47211996 End: 47220282 |
Description | Glycogen/starch synthases, ADP-glucose type |
View CDS |
External Links |
---|
NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
---|---|---|---|
Family | Start | End | Evalue |
GT5 | 143 | 641 | 0 |
NIVVVTSEAAPYSKTGGLADVCGSLPIALASRGHRVMVVTPRYIHGTSEDLKFAGAVDLDQSTKVFCFGGAQEIGFYHEYREGVDWVFVDHPSFHRPGNP YGDKFGTFGDNQFRFTLLCHAACEAPLVLPLGGFSYGEKCLFLANDWHASLVPILLAAKYRPHGVYKDARSILVIHNIAHQGVEPAITYRNLGLPSEWYG ALEWVFPTWARTHALDTGEAVNFLKGAVVTADRIVTVSKGYSWEITTSEGGCGLHDLLSSRKSILSGITNGIDVTEWDPSCDKHIACNYSADDLSGKAEC KISLQKELGLPMRPDCPMIGFIGRLDYQKGIDLIRLAMPELMEADVQFVMLGSGNPIYEDWMRATESIYKDKFRGWVGFNVPISHKITAGCDILLMPSAF EPCGLNQLYAMRYGTIPVVHETGGLRDTVHNFNPYAEESRAESTGWTFSPLTKESMLAALRYAIQTYNEYKSSWEGLMIRGMTRDYTWVNAATQYEQVI |
Full Sequence |
---|
Protein Sequence Length: 652 Download |
MESLELVPLL LLLHPPPSQS FNNSRSIRQL RFPSLLNSKT RNANLRSFSG NLQGGGGATS 60 QDGPFAFEDQ VSHHKDDRAL VLARETDDFG YLVGFRLLPN SGLEEFMNVS HSITEEDSSS 120 DEVEKPKVED TEEEEAKTRV SHNIVVVTSE AAPYSKTGGL ADVCGSLPIA LASRGHRVMV 180 VTPRYIHGTS EDLKFAGAVD LDQSTKVFCF GGAQEIGFYH EYREGVDWVF VDHPSFHRPG 240 NPYGDKFGTF GDNQFRFTLL CHAACEAPLV LPLGGFSYGE KCLFLANDWH ASLVPILLAA 300 KYRPHGVYKD ARSILVIHNI AHQGVEPAIT YRNLGLPSEW YGALEWVFPT WARTHALDTG 360 EAVNFLKGAV VTADRIVTVS KGYSWEITTS EGGCGLHDLL SSRKSILSGI TNGIDVTEWD 420 PSCDKHIACN YSADDLSGKA ECKISLQKEL GLPMRPDCPM IGFIGRLDYQ KGIDLIRLAM 480 PELMEADVQF VMLGSGNPIY EDWMRATESI YKDKFRGWVG FNVPISHKIT AGCDILLMPS 540 AFEPCGLNQL YAMRYGTIPV VHETGGLRDT VHNFNPYAEE SRAESTGWTF SPLTKESMLA 600 ALRYAIQTYN EYKSSWEGLM IRGMTRDYTW VNAATQYEQV IEWAFTDPPY C* 660 |
Functional Domains Download unfiltered results here | ||||||||
---|---|---|---|---|---|---|---|---|
Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PRK14099 | PRK14099 | 3.0e-102 | 144 | 639 | 512 | + glycogen synthase; Provisional | ||
COG0297 | GlgA | 2.0e-147 | 143 | 638 | 504 | + Glycogen synthase [Carbohydrate transport and metabolism] | ||
PRK00654 | glgA | 2.0e-176 | 143 | 640 | 508 | + glycogen synthase; Provisional | ||
cd03791 | GT1_Glycogen_synthase_DULL1_like | 0 | 143 | 643 | 502 | + This family is most closely related to the GT1 family of glycosyltransferases. Glycogen synthase catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms. | ||
TIGR02095 | glgA | 0 | 143 | 640 | 499 | + glycogen/starch synthase, ADP-glucose type. This family consists of glycogen (or starch) synthases that use ADP-glucose (EC 2.4.1.21), rather than UDP-glucose (EC 2.4.1.11) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate [Energy metabolism, Biosynthesis and degradation of polysaccharides]. |
Gene Ontology | |
---|---|
GO Term | Description |
GO:0009058 | biosynthetic process |
Annotations - NR Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ABV25893.1 | 0 | 1 | 650 | 1 | 631 | starch synthase isoform I [Manihot esculenta] |
DDBJ | BAD18845.1 | 0 | 1 | 651 | 1 | 645 | starch synthase I precursor [Phaseolus vulgaris] |
EMBL | CBI23015.1 | 0 | 80 | 650 | 1 | 566 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002277372.1 | 0 | 79 | 650 | 65 | 631 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002321996.1 | 0 | 25 | 650 | 29 | 647 | predicted protein [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3vuf_A | 0 | 143 | 641 | 11 | 508 | B Chain B, Crystal Structure Of Yeast AlphaBETAPRIME-Cop Subcomplex Of The Copi Vesicular Coat |
PDB | 3vue_A | 0 | 143 | 641 | 11 | 508 | A Chain A, Crystal Structure Of Rice Granule Bound Starch Synthase I Catalytic Domain |
PDB | 3d1j_A | 0 | 143 | 640 | 2 | 472 | A Chain A, Crystal Structure Of E.Coli Gs Mutant Dmgs(C7s;c40 |
PDB | 3guh_A | 0 | 143 | 640 | 2 | 472 | A Chain A, Crystal Structure Of E.Coli Gs Mutant Dmgs(C7s;c40 |
PDB | 2r4u_A | 0 | 143 | 640 | 2 | 472 | A Chain A, Crystal Structure Of E.Coli Gs Mutant Dmgs(C7s;c40 |
Metabolic Pathways | |||
---|---|---|---|
Pathway Name | Reaction | EC | Protein Name |
starch biosynthesis | GLYCOGENSYN-RXN | EC-2.4.1.21 | starch synthase |