Basic Information | |
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Species | Glycine max |
Cazyme ID | Glyma04g41460.1 |
Family | CE8 |
Protein Properties | Length: 582 Molecular Weight: 63577 Isoelectric Point: 9.4228 |
Chromosome | Chromosome/Scaffold: 04 Start: 47300184 End: 47304284 |
Description | pectin methylesterase PCR fragment F |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE8 | 266 | 564 | 0 |
DIVVSKDGNGTVKTIAEAIKKVPEYSSRRIIIYIRAGRYEEDNLKLGRKKTNVMFIGDGKGKTVITGGRNYYQNLTTFHTASFAASGSGFIAKDMTFENY AGPGRHQAVALRVGADHAVVYRCNIIGYQDTMYVHSNRQFYRECDIYGTVDFIFGNAAVVFQNCTLWARKPMAQQKNTITAQNRKDPNQNTGISIHNCRI MATPDLEASKGSYPTYLGRPWKLYARTVFMLSYIGDHVHPRGWLEWNTSSFALDTCYYGEYMNYGPGSALGQRVNWAGYRAINSTVEASRFTVGQFISG |
Full Sequence |
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Protein Sequence Length: 582 Download |
MEYGRLGPSD PGGSSRLNPP RSSGRKNIVF LSLFAVLLIA ASAVTAVAVR SRTKNTGGDG 60 TSLGKFTQAI SRTCSKTRFK MLCMKSLLDF PGSQGASEKD LVHISFNVTL QHFSKALYSS 120 ATISYTAMDP RVRAAYHDCL ELLDDSVDAL ARSLNTVSVG AVGSANDDVL TWLSAALTNQ 180 DTCAEGFADA AGTVKDQMAN NLKDLSELVS NCLAIFSGAG AGDDFAGVPI QNRRRLMAMR 240 EDNFPTWLNG RDRRLLSLPL SQIQADIVVS KDGNGTVKTI AEAIKKVPEY SSRRIIIYIR 300 AGRYEEDNLK LGRKKTNVMF IGDGKGKTVI TGGRNYYQNL TTFHTASFAA SGSGFIAKDM 360 TFENYAGPGR HQAVALRVGA DHAVVYRCNI IGYQDTMYVH SNRQFYRECD IYGTVDFIFG 420 NAAVVFQNCT LWARKPMAQQ KNTITAQNRK DPNQNTGISI HNCRIMATPD LEASKGSYPT 480 YLGRPWKLYA RTVFMLSYIG DHVHPRGWLE WNTSSFALDT CYYGEYMNYG PGSALGQRVN 540 WAGYRAINST VEASRFTVGQ FISGSSWLPS TGVAFIAGLS T* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02201 | PLN02201 | 6.0e-154 | 79 | 579 | 523 | + probable pectinesterase/pectinesterase inhibitor | ||
PLN02314 | PLN02314 | 8.0e-159 | 68 | 575 | 522 | + pectinesterase | ||
PLN02301 | PLN02301 | 4.0e-164 | 68 | 579 | 515 | + pectinesterase/pectinesterase inhibitor | ||
pfam01095 | Pectinesterase | 1.0e-177 | 266 | 565 | 300 | + Pectinesterase. | ||
PLN02484 | PLN02484 | 0 | 1 | 580 | 588 | + probable pectinesterase/pectinesterase inhibitor |
Gene Ontology | |
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GO Term | Description |
GO:0004857 | enzyme inhibitor activity |
GO:0005618 | cell wall |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
DDBJ | BAF42038.1 | 0 | 1 | 580 | 1 | 616 | pectin methylesterase 1 [Pyrus communis] |
RefSeq | NP_200149.1 | 0 | 1 | 580 | 1 | 586 | PMEPCRF (PECTIN METHYLESTERASE PCR FRAGMENT F); pectinesterase [Arabidopsis thaliana] |
RefSeq | XP_002278061.1 | 0 | 57 | 580 | 63 | 596 | PREDICTED: similar to pectin methylesterase 1 [Vitis vinifera] |
RefSeq | XP_002317777.1 | 0 | 65 | 579 | 32 | 550 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002321999.1 | 0 | 1 | 580 | 1 | 604 | predicted protein [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1gq8_A | 0 | 261 | 579 | 3 | 319 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 1xg2_A | 0 | 263 | 579 | 1 | 315 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 1qjv_B | 2e-20 | 268 | 537 | 7 | 315 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
PDB | 1qjv_A | 2e-20 | 268 | 537 | 7 | 315 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
PDB | 2ntq_B | 7e-20 | 268 | 537 | 7 | 315 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
homogalacturonan degradation | RXN-2102 | EC-3.1.1.11 | pectinesterase |