| Basic Information | |
|---|---|
| Species | Glycine max |
| Cazyme ID | Glyma05g24811.1 |
| Family | GH3 |
| Protein Properties | Length: 296 Molecular Weight: 31958.6 Isoelectric Point: 8.0649 |
| Chromosome | Chromosome/Scaffold: 05 Start: 31010185 End: 31012192 |
| Description | beta-D-xylosidase 4 |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH3 | 78 | 290 | 0 |
| DVSRLGIPRYEWWSEALHGVSNVGLGTRFSNVVPGATSFPMPILTAASFNTSLFEVIGRVVSTEAGAMYNVGLAGLTYWSPNINIFRDPRWGRGLETPGE DPVLTSKYAAGYVKGLQQTDGGDPNKLKVAACCKHYTAYDVDKWKGIQRYTFNAVLTKQDLEDTFQPPFKSCVIDGNVASVMCSYNKVNGKPTCADPDLL KGVVRGEWKLNGY | |||
| Full Sequence |
|---|
| Protein Sequence Length: 296 Download |
| MANKVLVLLC VLVTTLLSCC DVSVVRGQTF ACDVGKSPAV AGYGFCDKSL GVEARVKDLV 60 GRLTLQEKIG NLVNSAGDVS RLGIPRYEWW SEALHGVSNV GLGTRFSNVV PGATSFPMPI 120 LTAASFNTSL FEVIGRVVST EAGAMYNVGL AGLTYWSPNI NIFRDPRWGR GLETPGEDPV 180 LTSKYAAGYV KGLQQTDGGD PNKLKVAACC KHYTAYDVDK WKGIQRYTFN AVLTKQDLED 240 TFQPPFKSCV IDGNVASVMC SYNKVNGKPT CADPDLLKGV VRGEWKLNGY YEISAG 300 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PRK15098 | PRK15098 | 5.0e-29 | 37 | 289 | 296 | + beta-D-glucoside glucohydrolase; Provisional | ||
| COG1472 | BglX | 5.0e-32 | 67 | 290 | 231 | + Beta-glucosidase-related glycosidases [Carbohydrate transport and metabolism] | ||
| pfam00933 | Glyco_hydro_3 | 3.0e-53 | 50 | 290 | 246 | + Glycosyl hydrolase family 3 N terminal domain. | ||
| PLN03080 | PLN03080 | 2.0e-115 | 30 | 290 | 268 | + Probable beta-xylosidase; Provisional | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| Swiss-Prot | A5JTQ2 | 0 | 7 | 290 | 13 | 299 | XYL1_MEDVA RecName: Full=Beta-xylosidase/alpha-L-arabinofuranosidase 1; AltName: Full=Xylan 1,4-beta-xylosidase/Alpha-N-arabinofuranosidase 1; Short=MsXyl1; Includes: RecName: Full=Beta-xylosidase; AltName: Full=1,4-beta-D-xylan xylohydrolase; AltName: Full=Xylan 1,4-beta-xylosidase; Includes: RecName: Full=Alpha-N-arabinofuranosidase; AltName: Full=Alpha-L-arabinofuranosidase; Short=Arabinosidase; Flags: Precursor |
| Swiss-Prot | A5JTQ3 | 0 | 5 | 290 | 11 | 299 | XYL2_MEDVA RecName: Full=Beta-xylosidase/alpha-L-arabinofuranosidase 2; AltName: Full=Xylan 1,4-beta-xylosidase/Alpha-N-arabinofuranosidase 2; Short=MsXyl2; Includes: RecName: Full=Beta-xylosidase; AltName: Full=1,4-beta-D-xylan xylohydrolase; AltName: Full=Xylan 1,4-beta-xylosidase; Includes: RecName: Full=Alpha-N-arabinofuranosidase; AltName: Full=Alpha-L-arabinofuranosidase; Short=Arabinosidase; Flags: Precursor |
| RefSeq | NP_201262.1 | 0 | 6 | 290 | 23 | 304 | XYL4; hydrolase, hydrolyzing O-glycosyl compounds / xylan 1,4-beta-xylosidase [Arabidopsis thaliana] |
| RefSeq | XP_002298197.1 | 0 | 30 | 290 | 4 | 264 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002513707.1 | 0 | 30 | 290 | 41 | 301 | Beta-glucosidase, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 4i3g_B | 3e-23 | 54 | 290 | 52 | 270 | A Chain A, Crystal Structure Of Desr, A Beta-glucosidase From Streptomyces Venezuelae In Complex With D-glucose. |
| PDB | 4i3g_A | 3e-23 | 54 | 290 | 52 | 270 | A Chain A, Crystal Structure Of Desr, A Beta-glucosidase From Streptomyces Venezuelae In Complex With D-glucose. |
| PDB | 3ac0_D | 4e-22 | 56 | 289 | 6 | 220 | A Chain A, Crystal Structure Of Beta-Glucosidase From Kluyveromyces Marxianus In Complex With Glucose |
| PDB | 3ac0_C | 4e-22 | 56 | 289 | 6 | 220 | A Chain A, Crystal Structure Of Beta-Glucosidase From Kluyveromyces Marxianus In Complex With Glucose |
| PDB | 3ac0_B | 4e-22 | 56 | 289 | 6 | 220 | A Chain A, Crystal Structure Of Beta-Glucosidase From Kluyveromyces Marxianus In Complex With Glucose |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| (1,4)-β-xylan degradation | 3.2.1.37-RXN | EC-3.2.1.37 | xylan 1,4-β-xylosidase |
