| Basic Information | |
|---|---|
| Species | Glycine max |
| Cazyme ID | Glyma05g25790.1 |
| Family | GT5 |
| Protein Properties | Length: 990 Molecular Weight: 111941 Isoelectric Point: 5.7506 |
| Chromosome | Chromosome/Scaffold: 05 Start: 31857536 End: 31870400 |
| Description | starch synthase 4 |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| GT5 | 493 | 976 | 0 |
| HVIHIAAEMAPVAKVGGLGDVVSGLGKALQKKGHLVEIVLPKYDCMQYDRVCDLRALDVLIDSYFDRQLYKNKIWVGTIEGLPVYFIEPHHPDKFFWRGK FYGEHDDFRRFSFFSRAALEFLLQAGKKPDIIHCHDWQTAFIAPLYWDIYAPKGLNSARICFTCHNFEYQGTAAASELESCGLESHHLNRPDRMQDNSAH DRVNSVKGGIVFSNIVTTVSPTYAQEVRTSEGGHGLHSTLSAHSKKFIGILNGIDTDAWNPATDAFLPVQYNATDLQGKAENKQALRRNLGLSSTDVRRP LVGCITRLVPQKGVHLIRHAIYLTLELGGQFVLLGSSPVPHIQNEFEGIANHFQNHDHIRLILKYDESLSHVIYAASDMFIIPSIFEPCGLTQMISMRYG AIPIVRKTGGLNDSVFDVDDDTIPSQFRNGFTFVNADEQGLNGALVRAFNLFNNNPESWKQLVQKDMNIDFSWETSSAQYEELY | |||
| Full Sequence |
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| Protein Sequence Length: 990 Download |
| MASKLRTCFV CWNLSGFNCV NHHNANNNWV VRVSFPASCK MRHRATFSSQ HKRQQIKPSA 60 EGGLRQNQDE EDDTEVSLNN DDSVENLNDA TAPLAINING AEQAEQLSGR QLEDLLVMIK 120 NAEKNILLLN EARIRACEDL EKILVEKEAL QGEINVLETR LAETDARITV ANQEKIHVEF 180 LEGQLEKLRN ELAQKGSTER KYAELHDLQN DDLSDANPLS HNVSIHSLTE ELNSLRAENA 240 SLKNAIESFK TQLSDVKNND ERLVALEKER SSLESALKDL ESKLSISQDG VSQISTLTVE 300 CKDLWDKVEN LQSLLDKATK QADQAVLVLQ QNQDLRRKVD KLEASLEEAN IYKLSSDKLQ 360 KYNELMQQKI KLLEDRLQKS DEEINSYVWL YQQSVKEFQD TLDTLKKESK KRNLEEPVED 420 MPWEFWSQLL LLIDGWTLEN KISVDDASLL REKVWKRDRR ISDTYIACKK QTEQEAISAF 480 LGLLSSATSP GLHVIHIAAE MAPVAKVGGL GDVVSGLGKA LQKKGHLVEI VLPKYDCMQY 540 DRVCDLRALD VLIDSYFDRQ LYKNKIWVGT IEGLPVYFIE PHHPDKFFWR GKFYGEHDDF 600 RRFSFFSRAA LEFLLQAGKK PDIIHCHDWQ TAFIAPLYWD IYAPKGLNSA RICFTCHNFE 660 YQGTAAASEL ESCGLESHHL NRPDRMQDNS AHDRVNSVKG GIVFSNIVTT VSPTYAQEVR 720 TSEGGHGLHS TLSAHSKKFI GILNGIDTDA WNPATDAFLP VQYNATDLQG KAENKQALRR 780 NLGLSSTDVR RPLVGCITRL VPQKGVHLIR HAIYLTLELG GQFVLLGSSP VPHIQNEFEG 840 IANHFQNHDH IRLILKYDES LSHVIYAASD MFIIPSIFEP CGLTQMISMR YGAIPIVRKT 900 GGLNDSVFDV DDDTIPSQFR NGFTFVNADE QGLNGALVRA FNLFNNNPES WKQLVQKDMN 960 IDFSWETSSA QYEELYLKSV ARAKAAKLA* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02316 | PLN02316 | 6.0e-137 | 485 | 976 | 499 | + synthase/transferase | ||
| PLN02939 | PLN02939 | 0 | 35 | 986 | 975 | + transferase, transferring glycosyl groups | ||
| TIGR02095 | glgA | 0 | 492 | 976 | 488 | + glycogen/starch synthase, ADP-glucose type. This family consists of glycogen (or starch) synthases that use ADP-glucose (EC 2.4.1.21), rather than UDP-glucose (EC 2.4.1.11) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate [Energy metabolism, Biosynthesis and degradation of polysaccharides]. | ||
| cd03791 | GT1_Glycogen_synthase_DULL1_like | 0 | 493 | 976 | 489 | + This family is most closely related to the GT1 family of glycosyltransferases. Glycogen synthase catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms. | ||
| PRK00654 | glgA | 0 | 492 | 976 | 490 | + glycogen synthase; Provisional | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0009058 | biosynthetic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CAB40375.1 | 0 | 118 | 989 | 1 | 874 | starch synthase, isoform V [Vigna unguiculata] |
| RefSeq | NP_193558.3 | 0.000003 | 1 | 144 | 1 | 217 | ATSS4; transferase, transferring glycosyl groups [Arabidopsis thaliana] |
| RefSeq | NP_193558.3 | 0 | 253 | 986 | 303 | 1036 | ATSS4; transferase, transferring glycosyl groups [Arabidopsis thaliana] |
| RefSeq | XP_002274716.1 | 0 | 1 | 989 | 1 | 1011 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002298514.1 | 0 | 94 | 986 | 17 | 884 | predicted protein [Populus trichocarpa] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1rzv_B | 0 | 492 | 983 | 1 | 479 | A Chain A, Crystal Structure Of The Glycogen Synthase From Agrobacterium Tumefaciens (Non-Complexed Form) |
| PDB | 1rzv_A | 0 | 492 | 983 | 1 | 479 | A Chain A, Crystal Structure Of The Glycogen Synthase From Agrobacterium Tumefaciens (Non-Complexed Form) |
| PDB | 1rzu_B | 0 | 492 | 983 | 1 | 479 | A Chain A, Crystal Structure Of The Glycogen Synthase From A. Tumefaciens In Complex With Adp |
| PDB | 1rzu_A | 0 | 492 | 983 | 1 | 479 | A Chain A, Crystal Structure Of The Glycogen Synthase From A. Tumefaciens In Complex With Adp |
| PDB | 3d1j_A | 0 | 492 | 978 | 1 | 475 | A Chain A, Crystal Structure Of E.Coli Gs Mutant Dmgs(C7s;c40 |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| starch biosynthesis | GLYCOGENSYN-RXN | EC-2.4.1.21 | starch synthase |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
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| Hit | Length | Start | End | EValue |
| CF828776 | 286 | 617 | 902 | 0 |
| GO851132 | 333 | 567 | 899 | 0 |
| GR826552 | 238 | 753 | 990 | 0 |
| GW865616 | 280 | 616 | 895 | 0 |
| CB893818 | 281 | 491 | 771 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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