| Basic Information | |
|---|---|
| Species | Glycine max |
| Cazyme ID | Glyma05g28691.1 |
| Family | CBM43 |
| Protein Properties | Length: 192 Molecular Weight: 19677.2 Isoelectric Point: 5.5618 |
| Chromosome | Chromosome/Scaffold: 05 Start: 34491333 End: 34495517 |
| Description | Carbohydrate-binding X8 domain superfamily protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| CBM43 | 30 | 111 | 5.1e-35 |
| WCVARSDASNDALQTALDYACGSGGDCLPLQPDGLCFLPNTIQAHASYAFNSYYQRRARAPGSCDFAGTATIATSDPSYGSC | |||
| Full Sequence |
|---|
| Protein Sequence Length: 192 Download |
| MAAPKPVPLL LLITIITMGL SKNVLGQASW CVARSDASND ALQTALDYAC GSGGDCLPLQ 60 PDGLCFLPNT IQAHASYAFN SYYQRRARAP GSCDFAGTAT IATSDPSYGS CVYPSSASAA 120 GGPNTPTTTP PMNNPNVPTS TATQPIFGGG NTGGITPGMS TPFPDSSRAH SEATATWFLA 180 FFSSLIIFII S* 240 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam07983 | X8 | 7.0e-21 | 29 | 100 | 77 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
| smart00768 | X8 | 6.0e-38 | 29 | 113 | 85 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ACU14573.1 | 5.60519e-45 | 24 | 190 | 23 | 191 | unknown [Glycine max] |
| GenBank | ACU17645.1 | 0 | 1 | 191 | 1 | 191 | unknown [Glycine max] |
| RefSeq | NP_193096.5 | 0 | 28 | 190 | 59 | 231 | unknown protein [Arabidopsis thaliana] |
| RefSeq | XP_002267551.1 | 0 | 26 | 187 | 46 | 212 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002518089.1 | 0 | 10 | 116 | 7 | 113 | hydrolase, hydrolyzing O-glycosyl compounds, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 2jon_A | 4e-26 | 29 | 118 | 12 | 101 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |
