y
Basic Information | |
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Species | Glycine max |
Cazyme ID | Glyma05g28700.1 |
Family | CBM43 |
Protein Properties | Length: 145 Molecular Weight: 15069.8 Isoelectric Point: 7.2045 |
Chromosome | Chromosome/Scaffold: 05 Start: 34500802 End: 34501746 |
Description | Carbohydrate-binding X8 domain superfamily protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM43 | 29 | 110 | 3.2e-34 |
WCVARSNAGYGALKSGLDFACSHGADCRAIQPGGSCFNPNTIQNHASYAFDSYYQRNGKNPGACNFGGAATIAVSDPSFGRC |
Full Sequence |
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Protein Sequence Length: 145 Download |
MASSTAKVVS LVLIVVGRMM MNIVEANTWC VARSNAGYGA LKSGLDFACS HGADCRAIQP 60 GGSCFNPNTI QNHASYAFDS YYQRNGKNPG ACNFGGAATI AVSDPSFGRC VYPPSSSTDG 120 GVDTTITGLP MNSKTLQDQT NKED* 180 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam07983 | X8 | 2.0e-22 | 28 | 99 | 77 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
smart00768 | X8 | 7.0e-40 | 28 | 112 | 85 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ACU17645.1 | 3e-38 | 8 | 121 | 9 | 122 | unknown [Glycine max] |
RefSeq | NP_001118954.1 | 7e-31 | 9 | 112 | 8 | 112 | unknown protein [Arabidopsis thaliana] |
RefSeq | NP_193096.5 | 7e-33 | 26 | 127 | 58 | 159 | unknown protein [Arabidopsis thaliana] |
RefSeq | XP_002267551.1 | 6e-32 | 28 | 124 | 49 | 145 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002518089.1 | 6e-33 | 6 | 115 | 2 | 113 | hydrolase, hydrolyzing O-glycosyl compounds, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2jon_A | 4e-22 | 26 | 113 | 10 | 97 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |