| Basic Information | |
|---|---|
| Species | Glycine max |
| Cazyme ID | Glyma05g29790.2 |
| Family | CBM43 |
| Protein Properties | Length: 250 Molecular Weight: 25769.6 Isoelectric Point: 4.7393 |
| Chromosome | Chromosome/Scaffold: 05 Start: 35290945 End: 35292699 |
| Description | Carbohydrate-binding X8 domain superfamily protein |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| CBM43 | 76 | 158 | 1.9e-34 |
| WCVAKQGASDADLQVALDYACGIGRADCSAIQPGASCYNPNTVRDHASYAFNNYYQKNPIPNSCVFGGTASLTSNDPSYKDCK | |||
| Full Sequence |
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| Protein Sequence Length: 250 Download |
| LQMIVASLGT TKILTNDKKQ EIFSSSELGT QLDDVPIVGN PNTPPQTPDT SGQNPTAPNT 60 NPTTPTTTPT SSGGQWCVAK QGASDADLQV ALDYACGIGR ADCSAIQPGA SCYNPNTVRD 120 HASYAFNNYY QKNPIPNSCV FGGTASLTSN DPSYKDCKYA SPKSTSTNQP PQAPTVISPP 180 SAPTVVSPPS PPLFVSPPTP PGTLNPGGGS NVFGSEPKGN PNTATSAFYS LLLLFTCGLL 240 ASLQLANYI* 300 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam07983 | X8 | 9.0e-21 | 75 | 146 | 78 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
| smart00768 | X8 | 3.0e-36 | 75 | 159 | 86 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ABK94231.1 | 9.99967e-42 | 5 | 246 | 32 | 300 | unknown [Populus trichocarpa] |
| EMBL | CBI30817.1 | 4.99983e-42 | 72 | 249 | 31 | 195 | unnamed protein product [Vitis vinifera] |
| RefSeq | XP_002271903.1 | 5.99994e-41 | 72 | 249 | 126 | 290 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002512573.1 | 7e-37 | 56 | 249 | 202 | 402 | hydrolase, hydrolyzing O-glycosyl compounds, putative [Ricinus communis] |
| RefSeq | XP_002519744.1 | 1.99993e-41 | 73 | 249 | 112 | 282 | hydrolase, hydrolyzing O-glycosyl compounds, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 2jon_A | 2e-18 | 64 | 161 | 2 | 98 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| EV282922 | 190 | 6 | 171 | 0 |
| FF541445 | 189 | 6 | 161 | 0 |
| GO028661 | 180 | 73 | 250 | 0 |
| FF399000 | 168 | 6 | 140 | 0 |
| GO026782 | 177 | 76 | 250 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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