Basic Information | |
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Species | Glycine max |
Cazyme ID | Glyma05g29810.2 |
Family | CBM43 |
Protein Properties | Length: 197 Molecular Weight: 20022.1 Isoelectric Point: 4.2627 |
Chromosome | Chromosome/Scaffold: 05 Start: 35299913 End: 35301058 |
Description | Carbohydrate-binding X8 domain superfamily protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM43 | 43 | 120 | 2.9e-33 |
WCVAKQGASDADLQVALDYACGIGRADCSAIQPGASCYNPNTVRDHASYAFNNYYQKNPIPNSCVFGGTASLTNNDPT |
Full Sequence |
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Protein Sequence Length: 197 Download |
DVPIVGNPNT PPQTPDTSGQ NPTAPNTNPT TPTTTPTSSG GQWCVAKQGA SDADLQVALD 60 YACGIGRADC SAIQPGASCY NPNTVRDHAS YAFNNYYQKN PIPNSCVFGG TASLTNNDPT 120 PTVISPPSAP TVVSPPSPPL FVSPPTPPGT LNPGGGSNVF GSEPKGNPNT ATSAFYSLLL 180 LFTCGLLASL QLANYI* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam07983 | X8 | 3.0e-20 | 42 | 113 | 78 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
smart00768 | X8 | 3.0e-31 | 42 | 118 | 78 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ABK94231.1 | 6e-39 | 33 | 193 | 137 | 300 | unknown [Populus trichocarpa] |
EMBL | CBI30817.1 | 7e-39 | 39 | 196 | 31 | 195 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002271903.1 | 1e-37 | 39 | 196 | 126 | 290 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002316740.1 | 3e-36 | 41 | 120 | 1 | 80 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002519744.1 | 1e-38 | 40 | 196 | 112 | 282 | hydrolase, hydrolyzing O-glycosyl compounds, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2jon_A | 9e-17 | 31 | 128 | 2 | 98 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
GO028661 | 161 | 40 | 197 | 0 |
EV282922 | 128 | 3 | 118 | 6.02558e-44 |
GO026782 | 158 | 43 | 197 | 1.99965e-42 |
FF541445 | 81 | 38 | 118 | 7.00005e-41 |
GO031319 | 160 | 41 | 197 | 1e-39 |
Sequence Alignments (This image is cropped. Click for full image.) |
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