y
Basic Information | |
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Species | Glycine max |
Cazyme ID | Glyma05g36640.1 |
Family | GH14 |
Protein Properties | Length: 558 Molecular Weight: 63072.7 Isoelectric Point: 9.2305 |
Chromosome | Chromosome/Scaffold: 05 Start: 40459710 End: 40463737 |
Description | chloroplast beta-amylase |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH14 | 93 | 513 | 0 |
FVTLPVNSVGREGRVARPKAMMFSLKALATAGVEGVVIEIWWGLVEKNKPRVYDWRGYEELVAMACKCGLKVRAVLAFHQHGTGPDDPNWIPLPLWVLDE IQKDIELAYCDRFGRRNIEYISLGCDILPVLHGRSPIQAYADFMRNFRDTFGSLLGVIITGVQIGMGPGGELRYPSFSSQEPNLAWPHELGEFQCYDKYM LASLNASARNIGKREWGNGGPFGSGSLMQNPEHTDFFKNDGGSWDTPYGKFFLEWYSDMLLLHGERICREAETIFRGSEVHISAKLAAIHWHYVTQSHPS ELTAGYYNTSNRDGYLPIARMFSKYGFSMCCSCFEMQDAVMQKINPDGSPEGFLRQLLLAARLCDISLEGQNFSTNLDDGAFTQVLKMSKFYSDGIEKRS FSFNFVRMDKRLFESRNWDRF |
Full Sequence |
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Protein Sequence Length: 558 Download |
MAILSQSTAS FSFSFSFVST RTDSTRLTRF PSRVTFRARS PPRRHALVSS RLNSSRSPDA 60 GGSLSPDNGS GDVAYQLHHD FSPRRRRRGS PVFVTLPVNS VGREGRVARP KAMMFSLKAL 120 ATAGVEGVVI EIWWGLVEKN KPRVYDWRGY EELVAMACKC GLKVRAVLAF HQHGTGPDDP 180 NWIPLPLWVL DEIQKDIELA YCDRFGRRNI EYISLGCDIL PVLHGRSPIQ AYADFMRNFR 240 DTFGSLLGVI ITGVQIGMGP GGELRYPSFS SQEPNLAWPH ELGEFQCYDK YMLASLNASA 300 RNIGKREWGN GGPFGSGSLM QNPEHTDFFK NDGGSWDTPY GKFFLEWYSD MLLLHGERIC 360 REAETIFRGS EVHISAKLAA IHWHYVTQSH PSELTAGYYN TSNRDGYLPI ARMFSKYGFS 420 MCCSCFEMQD AVMQKINPDG SPEGFLRQLL LAARLCDISL EGQNFSTNLD DGAFTQVLKM 480 SKFYSDGIEK RSFSFNFVRM DKRLFESRNW DRFTRFVRQM SNGNIFRARL NSVRDVRLKT 540 TPVVAAVGLL YHLYQHS* 600 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02905 | PLN02905 | 5.0e-97 | 91 | 520 | 434 | + beta-amylase | ||
PLN02161 | PLN02161 | 1.0e-108 | 82 | 521 | 454 | + beta-amylase | ||
PLN02801 | PLN02801 | 4.0e-120 | 91 | 520 | 439 | + beta-amylase | ||
PLN00197 | PLN00197 | 5.0e-170 | 74 | 551 | 486 | + beta-amylase; Provisional | ||
PLN02803 | PLN02803 | 0 | 30 | 523 | 502 | + beta-amylase |
Gene Ontology | |
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GO Term | Description |
GO:0000272 | polysaccharide catabolic process |
GO:0016161 | beta-amylase activity |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CAN65860.1 | 0 | 1 | 545 | 1 | 541 | hypothetical protein [Vitis vinifera] |
RefSeq | XP_002263816.1 | 0 | 11 | 545 | 98 | 630 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002297961.1 | 0 | 1 | 551 | 1 | 552 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002304568.1 | 0 | 86 | 521 | 1 | 437 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002454872.1 | 0 | 113 | 530 | 1 | 417 | hypothetical protein SORBIDRAFT_03g000480 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1b1y_A | 0 | 92 | 520 | 8 | 435 | A Chain A, Sevenfold Mutant Of Barley Beta-Amylase |
PDB | 1v3i_A | 0 | 91 | 520 | 13 | 441 | A Chain A, The Roles Of Glu186 And Glu380 In The Catalytic Reaction Of Soybean Beta-Amylase |
PDB | 1byd_A | 0 | 91 | 520 | 13 | 441 | A Chain A, The Roles Of Glu186 And Glu380 In The Catalytic Reaction Of Soybean Beta-Amylase |
PDB | 1byc_A | 0 | 91 | 520 | 13 | 441 | A Chain A, The Roles Of Glu186 And Glu380 In The Catalytic Reaction Of Soybean Beta-Amylase |
PDB | 1byb_A | 0 | 91 | 520 | 13 | 441 | A Chain A, The Roles Of Glu186 And Glu380 In The Catalytic Reaction Of Soybean Beta-Amylase |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
starch degradation I | RXN-1827 | EC-3.2.1.2 | β-amylase |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
HO784754 | 306 | 27 | 331 | 0 |
HO784754 | 99 | 328 | 426 | 0 |
HO784754 | 66 | 426 | 489 | 0 |
EV266124 | 233 | 221 | 453 | 0 |
GT619065 | 265 | 142 | 406 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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