| Basic Information | |
|---|---|
| Species | Glycine max |
| Cazyme ID | Glyma06g00680.1 |
| Family | GH10 |
| Protein Properties | Length: 552 Molecular Weight: 62587.7 Isoelectric Point: 6.3484 |
| Chromosome | Chromosome/Scaffold: 06 Start: 375957 End: 379498 |
| Description | Glycosyl hydrolase family 10 protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH10 | 207 | 489 | 0 |
| SKDFPFGSAIAKTILGNVPYQNWFVKRFNAAVFENELKWYATEPDQGKVNYTISDQMLQFVRTNNIIARGHNIFWEDPKYTPPWVLNLTGTQLQSAVNSR IHSLMSQYKDEFVHWDVSNEMLHFDFYEERLGPNATLHFFQTAHKSDPLATLFMNDFNVVETCSDVKSTVDAYISRVRELQRNGIFMDGIGLEGHFTIPN PPLIRAILDKLATLGLPIWLTEVDISKTLDRDAQANYSEEVLREGFSHPSVNGIMLWTALHPNGCYQMCLTDNNFKNLPAGDA | |||
| Full Sequence |
|---|
| Protein Sequence Length: 552 Download |
| MQDIPFCSLI VFFFLIGASL VSPLYDGPLY DSTAYTECKE KPEEPLYGGG LFKTEQHSRR 60 GSIANNSYVP SLVLYNLTQG TIYSFSAWVR VKDSSSAMIR TTLETEKETH DCIGTVSAKH 120 RCWSFLKGGF VLNWPSNLSI IFFQNADGKD INIDVASPSL QPFTKQQWRI NQQYIINTQR 180 KRAVTIHVSD SNGRRLEGAS ICVEQISKDF PFGSAIAKTI LGNVPYQNWF VKRFNAAVFE 240 NELKWYATEP DQGKVNYTIS DQMLQFVRTN NIIARGHNIF WEDPKYTPPW VLNLTGTQLQ 300 SAVNSRIHSL MSQYKDEFVH WDVSNEMLHF DFYEERLGPN ATLHFFQTAH KSDPLATLFM 360 NDFNVVETCS DVKSTVDAYI SRVRELQRNG IFMDGIGLEG HFTIPNPPLI RAILDKLATL 420 GLPIWLTEVD ISKTLDRDAQ ANYSEEVLRE GFSHPSVNGI MLWTALHPNG CYQMCLTDNN 480 FKNLPAGDAV DKLLQEWQTG RVEGVSDVHG SYSFYGFLGE YRISVKYGNN TTKSTFSLSR 540 GDETRHFTIT I* 600 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG3693 | XynA | 4.0e-40 | 205 | 463 | 279 | + Beta-1,4-xylanase [Carbohydrate transport and metabolism] | ||
| pfam00331 | Glyco_hydro_10 | 8.0e-65 | 204 | 490 | 309 | + Glycosyl hydrolase family 10. | ||
| smart00633 | Glyco_10 | 2.0e-80 | 243 | 490 | 269 | + Glycosyl hydrolase family 10. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ABF94921.1 | 0 | 9 | 551 | 12 | 558 | Glycosyl hydrolase family 10 protein, expressed [Oryza sativa (japonica cultivar-group)] |
| EMBL | CBI37893.1 | 0 | 12 | 551 | 82 | 625 | unnamed protein product [Vitis vinifera] |
| RefSeq | NP_195577.2 | 0 | 26 | 551 | 30 | 562 | glycosyl hydrolase family 10 protein [Arabidopsis thaliana] |
| RefSeq | XP_002277675.1 | 0 | 20 | 551 | 19 | 549 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002534153.1 | 0 | 86 | 551 | 8 | 473 | Endo-1,4-beta-xylanase A precursor, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1v6y_A | 3e-30 | 212 | 463 | 16 | 275 | A Chain A, Crystal Structure Of Chimeric Xylanase Between Streptomyces Olivaceoviridis E-86 Fxyn And Cellulomonas Fimi Cex |
| PDB | 2g4f_B | 4e-30 | 212 | 431 | 16 | 239 | A Chain A, Crystal Structure Of Chimeric Xylanase Between Streptomyces Olivaceoviridis E-86 Fxyn And Cellulomonas Fimi Cex |
| PDB | 2g4f_A | 4e-30 | 212 | 431 | 16 | 239 | A Chain A, Crystal Structure Of Chimeric Xylanase Between Streptomyces Olivaceoviridis E-86 Fxyn And Cellulomonas Fimi Cex |
| PDB | 2g3j_A | 4e-30 | 212 | 431 | 16 | 239 | A Chain A, Crystal Structure Of Chimeric Xylanase Between Streptomyces Olivaceoviridis E-86 Fxyn And Cellulomonas Fimi Cex |
| PDB | 2g3i_A | 4e-30 | 212 | 431 | 16 | 239 | A Chain A, Structure Of S.Olivaceoviridis Xylanase Q88aR275A MUTANT |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| (1,4)-β-xylan degradation | 3.2.1.8-RXN | EC-3.2.1.8 | endo-1,4-β-xylanase |
