Basic Information | |
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Species | Glycine max |
Cazyme ID | Glyma06g08820.1 |
Family | GT43 |
Protein Properties | Length: 434 Molecular Weight: 49102.3 Isoelectric Point: 8.4625 |
Chromosome | Chromosome/Scaffold: 06 Start: 6445941 End: 6449180 |
Description | Nucleotide-diphospho-sugar transferases superfamily protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT43 | 199 | 407 | 0 |
LSQTLKLVPPPLLWIVVEMTSQSEETADILRSSGIMYRHLVCKTNLTNPSHRSILQRNVAMAHIEIHRLDGIVYFADDDNIYSLDLFQQMRETRRFGTWT VARLSGDKSSIVLQGPICNGSRVIGWHTNESNGKSKRFHAEMPGFSFNSTILWDPKRWHRPTLEPIRQLDSVKESLWVSTLIEQVVEDESQMEGLMHNCS RVMVWQIDL |
Full Sequence |
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Protein Sequence Length: 434 Download |
MASIRRTLSP VPRVGTVANG EVCSVASPLS KSSSSPQNFS PSVGLDYRAL VFGVFSPRSF 60 WALERSKPRG QLWRKVLFHF FICFIVGVSM GLIPLASTHM SSNIMPKQQA FSFEMISAVG 120 NFQPFENVKI NVTPSIDKAV NFNATFYSTV KEQELIDGVA YNVSDSQISE NPSLESQKLL 180 IIVTPTYNHL FQAYYLHRLS QTLKLVPPPL LWIVVEMTSQ SEETADILRS SGIMYRHLVC 240 KTNLTNPSHR SILQRNVAMA HIEIHRLDGI VYFADDDNIY SLDLFQQMRE TRRFGTWTVA 300 RLSGDKSSIV LQGPICNGSR VIGWHTNESN GKSKRFHAEM PGFSFNSTIL WDPKRWHRPT 360 LEPIRQLDSV KESLWVSTLI EQVVEDESQM EGLMHNCSRV MVWQIDLESS YSSYPQKWIA 420 KNNLDAIVHL PLV* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
cd00761 | Glyco_tranf_GTA_type | 0.003 | 182 | 288 | 109 | + Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold. Glycosyltransferases (GTs) are enzymes that synthesize oligosaccharides, polysaccharides, and glycoconjugates by transferring the sugar moiety from an activated nucleotide-sugar donor to an acceptor molecule, which may be a growing oligosaccharide, a lipid, or a protein. Based on the stereochemistry of the donor and acceptor molecules, GTs are classified as either retaining or inverting enzymes. To date, all GT structures adopt one of two possible folds, termed GT-A fold and GT-B fold. This hierarchy includes diverse families of glycosyl transferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. The majority of the proteins in this superfamily are Glycosyltransferase family 2 (GT-2) proteins. But it also includes families GT-43, GT-6, GT-8, GT13 and GT-7; which are evolutionarily related to GT-2 and share structure similarities. | ||
pfam03360 | Glyco_transf_43 | 4.0e-61 | 199 | 403 | 214 | + Glycosyltransferase family 43. | ||
PLN02458 | PLN02458 | 1.0e-87 | 62 | 410 | 357 | + transferase, transferring glycosyl groups | ||
cd00218 | GlcAT-I | 2.0e-89 | 178 | 408 | 237 | + Beta1,3-glucuronyltransferase I (GlcAT-I) is involved in the initial steps of proteoglycan synthesis. Beta1,3-glucuronyltransferase I (GlcAT-I) domain; GlcAT-I is a Key enzyme involved in the initial steps of proteoglycan synthesis. GlcAT-I catalyzes the transfer of a glucuronic acid moiety from the uridine diphosphate-glucuronic acid (UDP-GlcUA) to the common linkage region of trisaccharide Gal-beta-(1-3)-Gal-beta-(1-4)-Xyl of proteoglycans. The enzyme has two subdomains that bind the donor and acceptor substrate separately. The active site is located at the cleft between both subdomains in which the trisaccharide molecule is oriented perpendicular to the UDP. This family has been classified as Glycosyltransferase family 43 (GT-43). |
Gene Ontology | |
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GO Term | Description |
GO:0015018 | galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity |
GO:0016020 | membrane |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ACU18893.1 | 0 | 1 | 433 | 1 | 433 | unknown [Glycine max] |
EMBL | CAN81600.1 | 0 | 171 | 430 | 5 | 264 | hypothetical protein [Vitis vinifera] |
EMBL | CBI20871.1 | 0 | 1 | 430 | 1 | 447 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002309550.1 | 0 | 1 | 429 | 1 | 440 | glycosyl transferase [Populus trichocarpa] |
RefSeq | XP_002516557.1 | 0 | 1 | 430 | 1 | 437 | beta-1,3-glucuronyltransferase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1kws_B | 2e-25 | 180 | 409 | 3 | 239 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |
PDB | 1kws_A | 2e-25 | 180 | 409 | 3 | 239 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |
PDB | 1fgg_B | 2e-25 | 180 | 409 | 3 | 239 | A Chain A, Crystal Structure Of 1,3-Glucuronyltransferase I (Glcat-I) Complexed With Gal-Gal-Xyl, Udp, And Mn2+ |
PDB | 1fgg_A | 2e-25 | 180 | 409 | 3 | 239 | A Chain A, Crystal Structure Of 1,3-Glucuronyltransferase I (Glcat-I) Complexed With Gal-Gal-Xyl, Udp, And Mn2+ |
PDB | 3cu0_B | 2e-25 | 176 | 409 | 19 | 259 | A Chain A, Human Beta 1,3-Glucuronyltransferase I (Glcat-I) In Complex With Udp And Gal-Gal(6-So4)-Xyl(2-Po4)-O-Ser |