| Basic Information | |
|---|---|
| Species | Glycine max |
| Cazyme ID | Glyma06g13400.1 |
| Family | CE8 |
| Protein Properties | Length: 585 Molecular Weight: 64344.9 Isoelectric Point: 9.2419 |
| Chromosome | Chromosome/Scaffold: 06 Start: 10545467 End: 10550160 |
| Description | pectin methylesterase PCR fragment F |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| CE8 | 269 | 567 | 0 |
| DIVVSKDGNGTVKTIAEAIKKVPEYSSRRIIIYVRAGRYEEENLKLGRKKTNVMFIGDGKGKTVITGGRNYYQNLTTFHTASFAASGSGFIAKDMTFENY AGPGRHQAVALRVGADHAVVYRCNIIGYQDTMYVHSNRQFYRECDIYGTVDFIFGNAAVVFQNCTLWARKPMAQQKNTITAQNRKDPNQNTGISIHNCRI MATPDLEASKGSYPTYLGRPWKLYARTVYMLSYIGDHVHPRGWLEWNTSSFALDTCYYGEYMNYGPGSGLGQRVNWAGYRVINSTVEASRFTVGQFISG | |||
| Full Sequence |
|---|
| Protein Sequence Length: 585 Download |
| MEYGRLGPSD PGGSSRLNNV PPTSSGRKKI VLLSLFSVLL IAASAVTAVV VRSRIQQNTR 60 AHETRLGKPT QAISRTCSKT RFKTLCVKSL LDFPGSEEAS EKDLVHISFN VTLQHFSKAL 120 YSSAAMSYTA MDPRVRAAYD DCLELLDDSV DALARSLNTV SVGAVGSAND DVLTWLSAAL 180 TNQDTCAEGF TDAVGTVKDH MSSNLRDLSE LVSNCLAIFS GAGAGDDFAG VPIQNRRRLM 240 EMREDNFPTW LSRRDRKLLI LPLSQIQADI VVSKDGNGTV KTIAEAIKKV PEYSSRRIII 300 YVRAGRYEEE NLKLGRKKTN VMFIGDGKGK TVITGGRNYY QNLTTFHTAS FAASGSGFIA 360 KDMTFENYAG PGRHQAVALR VGADHAVVYR CNIIGYQDTM YVHSNRQFYR ECDIYGTVDF 420 IFGNAAVVFQ NCTLWARKPM AQQKNTITAQ NRKDPNQNTG ISIHNCRIMA TPDLEASKGS 480 YPTYLGRPWK LYARTVYMLS YIGDHVHPRG WLEWNTSSFA LDTCYYGEYM NYGPGSGLGQ 540 RVNWAGYRVI NSTVEASRFT VGQFISGSSW LPSTGVAFIA GLST* 600 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02314 | PLN02314 | 2.0e-162 | 69 | 578 | 524 | + pectinesterase | ||
| PLN02201 | PLN02201 | 1.0e-163 | 132 | 582 | 462 | + probable pectinesterase/pectinesterase inhibitor | ||
| PLN02301 | PLN02301 | 4.0e-171 | 69 | 582 | 517 | + pectinesterase/pectinesterase inhibitor | ||
| PLN02484 | PLN02484 | 0 | 1 | 583 | 588 | + probable pectinesterase/pectinesterase inhibitor | ||
| pfam01095 | Pectinesterase | 0 | 269 | 568 | 300 | + Pectinesterase. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004857 | enzyme inhibitor activity |
| GO:0005618 | cell wall |
| GO:0030599 | pectinesterase activity |
| GO:0042545 | cell wall modification |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| DDBJ | BAF42038.1 | 0 | 1 | 583 | 1 | 616 | pectin methylesterase 1 [Pyrus communis] |
| RefSeq | NP_190491.1 | 0 | 68 | 583 | 82 | 597 | pectinesterase family protein [Arabidopsis thaliana] |
| RefSeq | XP_002278061.1 | 0 | 68 | 583 | 71 | 596 | PREDICTED: similar to pectin methylesterase 1 [Vitis vinifera] |
| RefSeq | XP_002317777.1 | 0 | 68 | 582 | 32 | 550 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002321999.1 | 0 | 1 | 583 | 1 | 604 | predicted protein [Populus trichocarpa] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1gq8_A | 0 | 264 | 582 | 3 | 319 | A Chain A, Pectin Methylesterase From Carrot |
| PDB | 1xg2_A | 0 | 266 | 582 | 1 | 315 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 1qjv_B | 3e-19 | 271 | 540 | 7 | 315 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
| PDB | 1qjv_A | 3e-19 | 271 | 540 | 7 | 315 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
| PDB | 2ntq_B | 5e-19 | 271 | 540 | 7 | 315 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| homogalacturonan degradation | RXN-2102 | EC-3.1.1.11 | pectinesterase |
