| Basic Information | |
|---|---|
| Species | Glycine max |
| Cazyme ID | Glyma06g13480.1 |
| Family | GT5 |
| Protein Properties | Length: 634 Molecular Weight: 70031.1 Isoelectric Point: 5.4469 |
| Chromosome | Chromosome/Scaffold: 06 Start: 10612597 End: 10620659 |
| Description | Glycogen/starch synthases, ADP-glucose type |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| GT5 | 140 | 634 | 0 |
| NIVFVTSEAAPYSKTGGLADVCGSLPIALAGRGHRVMVVTPRYIHGTPEDLKFAGAVDLDQSTKVFCFGGAQEIGFYHEYREGVDWVFVDHPSFHRPGNP YGDTFGTFGDNQFRFTLLCHAACEAPLVLPLGGFTYGEKCLFLANDWHASLVPILLAAKYRPHGVYKDARSILVIHNIAHQGVEPAITYSNLGLPPEWYG ALGWVFPTWARTHALDTGEAVNFLKGAVVTSDRIVTVSKGYSWEITTSEGGCGLHDLLSSRKSILSGITNGIDVTEWDPSCDKHIASNYSADDLSGKAEC KISLQKELGLPVRPDCPMIGFIGRLDYQKGIDLIRLAMPELMEADVQFVMLGSGNPIYEDWMRATESAYKDKFRGWVGFNVPISHKITAGCDILLMPSAF EPCGLNQLYAMRYGTIPVVHETGGLRDTVHNYNPYTEESKAESTGWTFSPLTKDSMLAALRYAIQTYNEHKPSWEGLMIRGMTRDYTWVNAATQY | |||
| Full Sequence |
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| Protein Sequence Length: 634 Download |
| MESLELVPLL LLHPRASPPL QSIRQPRFPS LLNRKTRNAN LRSFSANLQG GGGGATSQGG 60 PFSFEDQTSH HKDDRALLIA RETDDFGYLV GFRLLPDSGL EELMSVSHTI TEEDSSSDEV 120 EKPEIEDTEE EGAKTRVSHN IVFVTSEAAP YSKTGGLADV CGSLPIALAG RGHRVMVVTP 180 RYIHGTPEDL KFAGAVDLDQ STKVFCFGGA QEIGFYHEYR EGVDWVFVDH PSFHRPGNPY 240 GDTFGTFGDN QFRFTLLCHA ACEAPLVLPL GGFTYGEKCL FLANDWHASL VPILLAAKYR 300 PHGVYKDARS ILVIHNIAHQ GVEPAITYSN LGLPPEWYGA LGWVFPTWAR THALDTGEAV 360 NFLKGAVVTS DRIVTVSKGY SWEITTSEGG CGLHDLLSSR KSILSGITNG IDVTEWDPSC 420 DKHIASNYSA DDLSGKAECK ISLQKELGLP VRPDCPMIGF IGRLDYQKGI DLIRLAMPEL 480 MEADVQFVML GSGNPIYEDW MRATESAYKD KFRGWVGFNV PISHKITAGC DILLMPSAFE 540 PCGLNQLYAM RYGTIPVVHE TGGLRDTVHN YNPYTEESKA ESTGWTFSPL TKDSMLAALR 600 YAIQTYNEHK PSWEGLMIRG MTRDYTWVNA ATQY |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PRK14099 | PRK14099 | 2.0e-105 | 144 | 634 | 503 | + glycogen synthase; Provisional | ||
| COG0297 | GlgA | 8.0e-151 | 140 | 634 | 503 | + Glycogen synthase [Carbohydrate transport and metabolism] | ||
| PRK00654 | glgA | 3.0e-180 | 140 | 634 | 503 | + glycogen synthase; Provisional | ||
| cd03791 | GT1_Glycogen_synthase_DULL1_like | 0 | 140 | 634 | 495 | + This family is most closely related to the GT1 family of glycosyltransferases. Glycogen synthase catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms. | ||
| TIGR02095 | glgA | 0 | 140 | 634 | 496 | + glycogen/starch synthase, ADP-glucose type. This family consists of glycogen (or starch) synthases that use ADP-glucose (EC 2.4.1.21), rather than UDP-glucose (EC 2.4.1.11) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate [Energy metabolism, Biosynthesis and degradation of polysaccharides]. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0009058 | biosynthetic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ABV25893.1 | 0 | 23 | 634 | 28 | 618 | starch synthase isoform I [Manihot esculenta] |
| DDBJ | BAD18845.1 | 0 | 1 | 634 | 1 | 631 | starch synthase I precursor [Phaseolus vulgaris] |
| EMBL | CBI23015.1 | 0 | 77 | 634 | 1 | 553 | unnamed protein product [Vitis vinifera] |
| RefSeq | XP_002277372.1 | 0 | 76 | 634 | 65 | 618 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002321996.1 | 0 | 55 | 634 | 60 | 634 | predicted protein [Populus trichocarpa] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3vuf_A | 0 | 140 | 634 | 11 | 504 | B Chain B, The Avrptob-Bak1 Complex Reveals Two Structurally Similar Kinaseinteracting Domains In A Single Type Iii Effector |
| PDB | 3vue_A | 0 | 140 | 634 | 11 | 504 | A Chain A, Crystal Structure Of Rice Granule Bound Starch Synthase I Catalytic Domain |
| PDB | 3d1j_A | 0 | 140 | 634 | 2 | 469 | A Chain A, Crystal Structure Of E.Coli Gs Mutant Dmgs(C7s;c40 |
| PDB | 1rzv_B | 0 | 140 | 634 | 2 | 468 | A Chain A, Crystal Structure Of The Glycogen Synthase From Agrobacterium Tumefaciens (Non-Complexed Form) |
| PDB | 1rzv_A | 0 | 140 | 634 | 2 | 468 | A Chain A, Crystal Structure Of The Glycogen Synthase From Agrobacterium Tumefaciens (Non-Complexed Form) |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| starch biosynthesis | GLYCOGENSYN-RXN | EC-2.4.1.21 | starch synthase |
| Hydropathy |
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| EST Download unfiltered results here | ||||
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| Hit | Length | Start | End | EValue |
| HO595058 | 479 | 156 | 634 | 0 |
| HO581986 | 368 | 249 | 615 | 0 |
| GO872237 | 335 | 300 | 634 | 0 |
| EL610020 | 270 | 293 | 562 | 0 |
| GO842198 | 336 | 163 | 498 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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