| Basic Information | |
|---|---|
| Species | Glycine max |
| Cazyme ID | Glyma06g15711.1 |
| Family | CE8 |
| Protein Properties | Length: 344 Molecular Weight: 38109.7 Isoelectric Point: 6.5126 |
| Chromosome | Chromosome/Scaffold: 06 Start: 12357772 End: 12361126 |
| Description | Plant invertase/pectin methylesterase inhibitor superfamily |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| CE8 | 41 | 335 | 0 |
| GRYYETVQEAVNAAPDEGEKRFVIYIKEGVYEERVRVPLKKRNVVFLGDGMGKTVITGSANVGQPGMTTYNSATVGVAGDGFIAKDLTIQNTAGANAHQA VAFRSDSDLSVIENCEFIGNQDTLYAHSLRQFYRSCRIIGNVDFIFGNSAAIFQDCEILVRPRQARPEKGENNAITAHGRTDPAQSTGFVFQNCMVNGTE EYMALYYSKPKVHKNYLGRPWKEYSRTVFIHSFFEALITPQGWMPWSGDFALKTLYYGEFQNSGPGSNLTQRVPWSNQVPAEHVFSYSVQSFIQG | |||
| Full Sequence |
|---|
| Protein Sequence Length: 344 Download |
| MTERDGFWEP SVTEGFGVGP AVPSKLTADV TVCKGKGKGE GRYYETVQEA VNAAPDEGEK 60 RFVIYIKEGV YEERVRVPLK KRNVVFLGDG MGKTVITGSA NVGQPGMTTY NSATVGVAGD 120 GFIAKDLTIQ NTAGANAHQA VAFRSDSDLS VIENCEFIGN QDTLYAHSLR QFYRSCRIIG 180 NVDFIFGNSA AIFQDCEILV RPRQARPEKG ENNAITAHGR TDPAQSTGFV FQNCMVNGTE 240 EYMALYYSKP KVHKNYLGRP WKEYSRTVFI HSFFEALITP QGWMPWSGDF ALKTLYYGEF 300 QNSGPGSNLT QRVPWSNQVP AEHVFSYSVQ SFIQGDDWNH HLS* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02201 | PLN02201 | 6.0e-113 | 24 | 338 | 322 | + probable pectinesterase/pectinesterase inhibitor | ||
| PLN02301 | PLN02301 | 2.0e-117 | 21 | 338 | 325 | + pectinesterase/pectinesterase inhibitor | ||
| PLN02713 | PLN02713 | 9.0e-118 | 44 | 338 | 304 | + Probable pectinesterase/pectinesterase inhibitor | ||
| pfam01095 | Pectinesterase | 4.0e-165 | 29 | 336 | 311 | + Pectinesterase. | ||
| PLN02708 | PLN02708 | 0 | 2 | 338 | 343 | + Probable pectinesterase/pectinesterase inhibitor | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005618 | cell wall |
| GO:0030599 | pectinesterase activity |
| GO:0042545 | cell wall modification |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| DDBJ | BAF42039.1 | 0 | 2 | 338 | 237 | 572 | pectin methylesterase 2 [Pyrus communis] |
| RefSeq | XP_002281640.1 | 0 | 2 | 338 | 214 | 550 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002306241.1 | 0 | 2 | 338 | 216 | 553 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002309906.1 | 0 | 2 | 338 | 221 | 559 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002517239.1 | 0 | 2 | 338 | 210 | 547 | Pectinesterase-2 precursor, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1gq8_A | 0 | 32 | 338 | 10 | 307 | A Chain A, Pectin Methylesterase From Carrot |
| PDB | 1xg2_A | 0 | 44 | 338 | 15 | 303 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 2ntq_B | 3e-22 | 36 | 342 | 10 | 341 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 2ntq_A | 3e-22 | 36 | 342 | 10 | 341 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 2ntp_B | 3e-22 | 36 | 342 | 10 | 341 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| homogalacturonan degradation | RXN-2102 | EC-3.1.1.11 | pectinesterase |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
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| Hit | Length | Start | End | EValue |
| EX671576 | 273 | 66 | 338 | 0 |
| DT745154 | 275 | 64 | 338 | 0 |
| EC956172 | 263 | 76 | 338 | 0 |
| DW094242 | 281 | 21 | 300 | 0 |
| DT571356 | 262 | 41 | 300 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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