| Basic Information | |
|---|---|
| Species | Glycine max |
| Cazyme ID | Glyma06g16770.2 |
| Family | GT47 |
| Protein Properties | Length: 477 Molecular Weight: 55233.6 Isoelectric Point: 6.8269 |
| Chromosome | Chromosome/Scaffold: 06 Start: 13180482 End: 13183253 |
| Description | Exostosin family protein |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GT47 | 145 | 426 | 0 |
| EKVFKIFVYEEGEPPLFHNGLSKDIYATEGRFIHEMEKGRYYRTYDPDEAFVYYLPFSVVMLVEYVYDRGSNYNLDPLGLVVKDYIQIIAHKHPFWNRSL GHDHVMLSCHDWGPLVSSYVDHLYNNAIRVLCNANTSEGFKPAKDVSFPEIKLIKGEVKGLGGYPPSQRTILAFFAGHLHGYIRYLLLSTWKNKDQDMQI YEELPEGISYYTKLRSSKFCLCPSGYEVASPRVVEAIFAECVPVLISDSYVPPFSDVLNWNSFSVQVNVKDIPNIKRILMEI | |||
| Full Sequence |
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| Protein Sequence Length: 477 Download |
| QISSFSISNF NFFTLIELRS AWGEPTSSLD TENKSASILH DDDEGEATPS PTAFDSDHHH 60 GPHQEIFNEG DEKLDTKFKH NGYLRDHKYT KLGSIEARLA KARYSIREAS KIPNFTPTLQ 120 DPDYVPQGSI YRNANAFHRS YLEMEKVFKI FVYEEGEPPL FHNGLSKDIY ATEGRFIHEM 180 EKGRYYRTYD PDEAFVYYLP FSVVMLVEYV YDRGSNYNLD PLGLVVKDYI QIIAHKHPFW 240 NRSLGHDHVM LSCHDWGPLV SSYVDHLYNN AIRVLCNANT SEGFKPAKDV SFPEIKLIKG 300 EVKGLGGYPP SQRTILAFFA GHLHGYIRYL LLSTWKNKDQ DMQIYEELPE GISYYTKLRS 360 SKFCLCPSGY EVASPRVVEA IFAECVPVLI SDSYVPPFSD VLNWNSFSVQ VNVKDIPNIK 420 RILMEISEKQ YLRMHKRVKQ VQRHFVPNEP PKRYDMFHMT VHSIWLRRLN INIQDQ* 480 |
| Functional Domains Download unfiltered results here | ||||||
|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description |
| pfam03016 | Exostosin | 1.0e-64 | 144 | 426 | 303 | + Exostosin family. The EXT family is a family of tumour suppressor genes. Mutations of EXT1 on 8q24.1, EXT2 on 11p11-13, and EXT3 on 19p have been associated with the autosomal dominant disorder known as hereditary multiple exostoses (HME). This is the most common known skeletal dysplasia. The chromosomal locations of other EXT genes suggest association with other forms of neoplasia. EXT1 and EXT2 have both been shown to encode a heparan sulphate polymerase with both D-glucuronyl (GlcA) and N-acetyl-D-glucosaminoglycan (GlcNAC) transferase activities. The nature of the defect in heparan sulphate biosynthesis in HME is unclear. |
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0016020 | membrane |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAU04753.1 | 0 | 139 | 475 | 7 | 343 | EXO [Cucumis melo] |
| EMBL | CBI28483.1 | 0 | 85 | 475 | 26 | 416 | unnamed protein product [Vitis vinifera] |
| RefSeq | XP_002264076.1 | 0 | 144 | 475 | 1 | 332 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002320538.1 | 0 | 144 | 475 | 1 | 332 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002524591.1 | 0 | 88 | 475 | 117 | 504 | catalytic, putative [Ricinus communis] |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| xylogalacturonan biosynthesis | RXN-9589 | EC-2.4.2.41 | xylogalacturonan β-1,3-xylosyltransferase |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| EG631371 | 248 | 228 | 475 | 0 |
| GW895167 | 316 | 102 | 417 | 0 |
| GW864815 | 306 | 160 | 463 | 0 |
| FE523338 | 286 | 124 | 407 | 0 |
| DT001362 | 235 | 160 | 393 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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