| Basic Information | |
|---|---|
| Species | Glycine max |
| Cazyme ID | Glyma06g47190.1 |
| Family | CE8 |
| Protein Properties | Length: 576 Molecular Weight: 64004.8 Isoelectric Point: 9.7411 |
| Chromosome | Chromosome/Scaffold: 06 Start: 49699181 End: 49702552 |
| Description | root hair specific 12 |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| CE8 | 270 | 560 | 0 |
| IVVAKDGSGKYKKISDALKHVPNNSNKRTVIYVKRGVYYENVRVEKTKWNVMIIGDGMTSTIVSGSRNFVDGTPTFSTATFAVFGRNFIARDMGFRNTAG PQKHQAVALMTSADQAVYYRCHIDAYQDTLYAHSNRQFYRECNIYGTVDFIFGNSAVVIQNCNIRPKLPMHGQQNTITAQGKTDPNMNTGISIQHCNISP FGNLSSVQTYLGRPWKNYSTTVYMRSRMDGFVSPKGWLPWTGNSAPDTIFYAEFQNVGPGASTKNRVKWKGLRTITSKQASKFTIKAFLQG | |||
| Full Sequence |
|---|
| Protein Sequence Length: 576 Download |
| MSSLKSYGKV DEHEQMVLEA RRKTRKRITI IGLSSIVLAG VIFAAIFGIV STTHDNSQDA 60 NDAHTVTSSL RAVCDVTLYK DSCYSSLGSV VDSRQVQPEE LFILSMKLAL SEVSKAVEYF 120 SDHHLDGVFK GLKLMDGRTK EGLKNCKELL GLAVDHLNSS LTSGEKSSVL DVFEDLKTWL 180 SAAGTYQQTC IEGFEDAKEA IKSSVVSYLR NSTQFTSNSL AIITWISKAA TTLNLRRLLS 240 LPHQNEAPEW LHSKDRKLLL TEDLREKAHI VVAKDGSGKY KKISDALKHV PNNSNKRTVI 300 YVKRGVYYEN VRVEKTKWNV MIIGDGMTST IVSGSRNFVD GTPTFSTATF AVFGRNFIAR 360 DMGFRNTAGP QKHQAVALMT SADQAVYYRC HIDAYQDTLY AHSNRQFYRE CNIYGTVDFI 420 FGNSAVVIQN CNIRPKLPMH GQQNTITAQG KTDPNMNTGI SIQHCNISPF GNLSSVQTYL 480 GRPWKNYSTT VYMRSRMDGF VSPKGWLPWT GNSAPDTIFY AEFQNVGPGA STKNRVKWKG 540 LRTITSKQAS KFTIKAFLQG DKWISASGAP FKSDL* 600 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02484 | PLN02484 | 7.0e-167 | 33 | 575 | 557 | + probable pectinesterase/pectinesterase inhibitor | ||
| PLN02745 | PLN02745 | 4.0e-168 | 33 | 572 | 578 | + Putative pectinesterase/pectinesterase inhibitor | ||
| PLN02468 | PLN02468 | 0 | 4 | 575 | 574 | + putative pectinesterase/pectinesterase inhibitor | ||
| PLN02314 | PLN02314 | 0 | 3 | 575 | 597 | + pectinesterase | ||
| pfam01095 | Pectinesterase | 0 | 269 | 561 | 298 | + Pectinesterase. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004857 | enzyme inhibitor activity |
| GO:0005618 | cell wall |
| GO:0030599 | pectinesterase activity |
| GO:0042545 | cell wall modification |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CBI29155.1 | 0 | 1 | 575 | 1 | 561 | unnamed protein product [Vitis vinifera] |
| RefSeq | XP_002273396.1 | 0 | 1 | 575 | 4 | 564 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002311918.1 | 0 | 1 | 575 | 1 | 568 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002316458.1 | 0 | 1 | 575 | 1 | 569 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002515781.1 | 0 | 1 | 575 | 1 | 573 | Pectinesterase-3 precursor, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1gq8_A | 0 | 269 | 575 | 8 | 319 | A Chain A, Pectin Methylesterase From Carrot |
| PDB | 1xg2_A | 0 | 268 | 575 | 3 | 315 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 2ntq_B | 5e-18 | 269 | 553 | 5 | 329 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 2ntq_A | 5e-18 | 269 | 553 | 5 | 329 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 2ntp_B | 5e-18 | 269 | 553 | 5 | 329 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| homogalacturonan degradation | RXN-2102 | EC-3.1.1.11 | pectinesterase |
