| Basic Information | |
|---|---|
| Species | Glycine max |
| Cazyme ID | Glyma07g14930.2 |
| Family | CE8 |
| Protein Properties | Length: 520 Molecular Weight: 57934.4 Isoelectric Point: 9.4052 |
| Chromosome | Chromosome/Scaffold: 07 Start: 14811034 End: 14817651 |
| Description | Pectin lyase-like superfamily protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| CE8 | 223 | 512 | 0 |
| VDKNPNAGDFTSIQEAIDSLPFINLVRVVIKVHAGVYTEKVNIPPLKSYITIEGADADKTIVKWGDTAQTPGSNGRPLGTYGSATFAVNSPYFLAKNITF QNTTPVPAPGAVGKQAVALRISADTAAFVGCKFLGAQDTLYDHLGRHFYKDCYIEGSVDFIFGNSLSLFEGCHVHAIAQNTGAVTAQGRSSMLEDTGFSF VNCKVTGSGALYLGRAWGPFSRVVFAYTYMENIIIPKGWYNWGDPNREMTVFYGQYKCTGLGASFAGRVPWSRELTDEEATPFLSLSFVD | |||
| Full Sequence |
|---|
| Protein Sequence Length: 520 Download |
| MRKKRFPKQR KSKLQPRRDR HFQVLERIND NAYKIDIPGE YGVSSSFNVV DLTPFVVGDD 60 SEDLKANVFQ EGGNDENSKT VQIQESMTSS HFKFQRPFPI RVIVNIIFTN IIFFPPSLCH 120 INNLIPQFFL SLFVVSLTMS NLHCMFILLA VLVLLLQNSS RIHCHTKGIR PRRSAGKVLS 180 TNMTRVHYSE QQFMKWVNFV GSLKHSVFKS AKNKLVASYT LHVDKNPNAG DFTSIQEAID 240 SLPFINLVRV VIKVHAGVYT EKVNIPPLKS YITIEGADAD KTIVKWGDTA QTPGSNGRPL 300 GTYGSATFAV NSPYFLAKNI TFQNTTPVPA PGAVGKQAVA LRISADTAAF VGCKFLGAQD 360 TLYDHLGRHF YKDCYIEGSV DFIFGNSLSL FEGCHVHAIA QNTGAVTAQG RSSMLEDTGF 420 SFVNCKVTGS GALYLGRAWG PFSRVVFAYT YMENIIIPKG WYNWGDPNRE MTVFYGQYKC 480 TGLGASFAGR VPWSRELTDE EATPFLSLSF VDGTEWIKV* 540 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02304 | PLN02304 | 7.0e-114 | 220 | 518 | 307 | + probable pectinesterase | ||
| PLN02634 | PLN02634 | 2.0e-114 | 180 | 517 | 339 | + probable pectinesterase | ||
| PLN02432 | PLN02432 | 7.0e-115 | 221 | 518 | 298 | + putative pectinesterase | ||
| PLN02665 | PLN02665 | 5.0e-116 | 230 | 517 | 290 | + pectinesterase family protein | ||
| PLN02682 | PLN02682 | 0 | 181 | 518 | 338 | + pectinesterase family protein | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005618 | cell wall |
| GO:0030599 | pectinesterase activity |
| GO:0042545 | cell wall modification |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CAN63186.1 | 0 | 139 | 519 | 1 | 379 | hypothetical protein [Vitis vinifera] |
| RefSeq | NP_001044216.1 | 0 | 147 | 519 | 8 | 384 | Os01g0743200 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | NP_197474.1 | 0 | 159 | 519 | 23 | 383 | pectinesterase family protein [Arabidopsis thaliana] |
| RefSeq | XP_002330522.1 | 0 | 139 | 519 | 1 | 381 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002514210.1 | 0 | 139 | 519 | 1 | 383 | Pectinesterase PPE8B precursor, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1gq8_A | 0 | 229 | 519 | 16 | 310 | A Chain A, Pectin Methylesterase From Carrot |
| PDB | 1xg2_A | 3.00018e-42 | 230 | 518 | 13 | 305 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 3uw0_A | 2e-26 | 216 | 441 | 28 | 271 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |
| PDB | 2ntq_B | 3e-19 | 216 | 505 | 1 | 328 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |
| PDB | 2ntq_A | 3e-19 | 216 | 505 | 1 | 328 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| homogalacturonan degradation | RXN-2102 | EC-3.1.1.11 | pectinesterase |
