Basic Information | |
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Species | Glycine max |
Cazyme ID | Glyma07g27450.2 |
Family | CE8 |
Protein Properties | Length: 316 Molecular Weight: 35351.7 Isoelectric Point: 7.6519 |
Chromosome | Chromosome/Scaffold: 07 Start: 30633157 End: 30637857 |
Description | Pectin lyase-like superfamily protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE8 | 19 | 304 | 0 |
IIVDRLGNGHFSTIQSAIDSVASYNKNWVYIYVMAGTYREKVKITSDKPFIVLKGEGQKNTFVEWHDHDSSAESPTFTTMADNVVVKSISFRNTYNNNRN ANSMEAAVAAMIFGDRSYFYDVGFFGLQDTLWDGQGRHYFKSCTIQGAMDFIFGTGQSLYEDCTISAIGANLGPGIIGFITAQGRTNPNDANGFVFKHCN IVGNGTTYLGRPWRGYARVLFYDTKISNIIQPLGWQPWDFAGHEDHITFAEYGNSGPGSDTSKRVSWLKKLDSSTVSKLATTSFID |
Full Sequence |
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Protein Sequence Length: 316 Download |
MQHNSLKQTF PWKKMMWTII VDRLGNGHFS TIQSAIDSVA SYNKNWVYIY VMAGTYREKV 60 KITSDKPFIV LKGEGQKNTF VEWHDHDSSA ESPTFTTMAD NVVVKSISFR NTYNNNRNAN 120 SMEAAVAAMI FGDRSYFYDV GFFGLQDTLW DGQGRHYFKS CTIQGAMDFI FGTGQSLYED 180 CTISAIGANL GPGIIGFITA QGRTNPNDAN GFVFKHCNIV GNGTTYLGRP WRGYARVLFY 240 DTKISNIIQP LGWQPWDFAG HEDHITFAEY GNSGPGSDTS KRVSWLKKLD SSTVSKLATT 300 SFIDTEGWLN TLTQL* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02682 | PLN02682 | 2.0e-76 | 18 | 309 | 303 | + pectinesterase family protein | ||
PLN02480 | PLN02480 | 2.0e-80 | 18 | 309 | 293 | + Probable pectinesterase | ||
PLN02432 | PLN02432 | 2.0e-80 | 19 | 309 | 291 | + putative pectinesterase | ||
PLN02176 | PLN02176 | 8.0e-99 | 14 | 312 | 301 | + putative pectinesterase | ||
PLN02497 | PLN02497 | 3.0e-156 | 11 | 312 | 304 | + probable pectinesterase |
Gene Ontology | |
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GO Term | Description |
GO:0005618 | cell wall |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CBI40838.1 | 0 | 6 | 310 | 32 | 338 | unnamed protein product [Vitis vinifera] |
RefSeq | NP_189055.1 | 0 | 6 | 312 | 21 | 331 | pectinesterase family protein [Arabidopsis thaliana] |
RefSeq | XP_002263748.1 | 0 | 18 | 310 | 31 | 325 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002323773.1 | 0 | 19 | 309 | 1 | 284 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002518106.1 | 0 | 18 | 309 | 47 | 331 | Pectinesterase U1 precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1gq8_A | 1.4013e-45 | 19 | 313 | 9 | 312 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 1xg2_A | 1e-38 | 20 | 285 | 6 | 277 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntq_B | 6e-19 | 29 | 231 | 18 | 245 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntq_A | 6e-19 | 29 | 231 | 18 | 245 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntp_B | 6e-19 | 29 | 231 | 18 | 245 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
homogalacturonan degradation | RXN-2102 | EC-3.1.1.11 | pectinesterase |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
DV984237 | 287 | 29 | 310 | 0 |
AW036464 | 210 | 78 | 285 | 0 |
EE476551 | 220 | 19 | 234 | 0 |
EX315894 | 273 | 43 | 310 | 0 |
EX317112 | 270 | 46 | 310 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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