| Basic Information | |
|---|---|
| Species | Glycine max |
| Cazyme ID | Glyma07g31970.2 |
| Family | CBM57 |
| Protein Properties | Length: 625 Molecular Weight: 69131.8 Isoelectric Point: 8.0229 |
| Chromosome | Chromosome/Scaffold: 07 Start: 36913370 End: 36919204 |
| Description | receptor like protein 4 |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| CBM57 | 244 | 359 | 9.5e-24 |
| QASHPPNFYPETLYQSALVSTNNEPDLTYALEVDPNRNYSVWLHFAEIDNSVTAAGQRVFNIIINDDHAFKDVDIVELSGDIYTALVLNTTVTVNGRILT ITLKPKEGNLAIINAI | |||
| Full Sequence |
|---|
| Protein Sequence Length: 625 Download |
| MLLRFLQLWI MLRFACVSCA ARQDPFAMHI SCGARQNVQT KPTNTLWRED FGFTGGIAAN 60 ATRPSFITPP LNTLRYFPLS EGPQNCYNIN KVPKGHYSIR IFFGLVGRSK DTSEPLFDIS 120 IEGTQIYSLK PGWNKQNDQV FVEALVFLTN DSVSICFHST GHGDPAILSI EIQQIDDKAY 180 YFGPWWSQGI ILRTVKRLSC GFGQSKFDVD YGGDSRGGDR FWQRIKTFGD ESDQPRSVET 240 RIKQASHPPN FYPETLYQSA LVSTNNEPDL TYALEVDPNR NYSVWLHFAE IDNSVTAAGQ 300 RVFNIIINDD HAFKDVDIVE LSGDIYTALV LNTTVTVNGR ILTITLKPKE GNLAIINAIE 360 IFEVIMVESK TISEEVSALQ TLKKALGLPP RFGWNGDPCV PQQHPWFGVD CQLNKSSGSW 420 IIDGLGLDNQ GLKGFLPDDI SRLLNLQILN LSKNNIHGAI PSLLGTITSL QVLDLSYNLF 480 SGSIPESLGQ LTSLQRLNLN SNLLSGRVPS TVGGRLLYRA SFNFTDNAGL CGLPGLPTCG 540 PHLSGGGKIG IGLGASFTFL LLITCSFCWW KRRQNILRAQ QMAARAAPYA KARTHFSRDI 600 QMARHHNNYG KTSTAAENGP ILLS* 660 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam11721 | Malectin | 0.0002 | 28 | 170 | 159 | + Di-glucose binding within endoplasmic reticulum. Malectin is a membrane-anchored protein of the endoplasmic reticulum that recognises and binds Glc2-N-glycan. It carries a signal peptide from residues 1-26, a C-terminal transmembrane helix from residues 255-274, and a highly conserved central part of approximately 190 residues followed by an acidic, glutamate-rich region. Carbohydrate-binding is mediated by the four aromatic residues, Y67, Y89, Y116, and F117 and the aspartate at D186. NMR-based ligand-screening studies has shown binding of the protein to maltose and related oligosaccharides, on the basis of which the protein has been designated "malectin", and its endogenous ligand is found to be Glc2-high-mannose N-glycan. | ||
| PLN00113 | PLN00113 | 3.0e-10 | 373 | 513 | 166 | + leucine-rich repeat receptor-like protein kinase; Provisional | ||
| pfam11721 | Malectin | 2.0e-13 | 254 | 359 | 118 | + Di-glucose binding within endoplasmic reticulum. Malectin is a membrane-anchored protein of the endoplasmic reticulum that recognises and binds Glc2-N-glycan. It carries a signal peptide from residues 1-26, a C-terminal transmembrane helix from residues 255-274, and a highly conserved central part of approximately 190 residues followed by an acidic, glutamate-rich region. Carbohydrate-binding is mediated by the four aromatic residues, Y67, Y89, Y116, and F117 and the aspartate at D186. NMR-based ligand-screening studies has shown binding of the protein to maltose and related oligosaccharides, on the basis of which the protein has been designated "malectin", and its endogenous ligand is found to be Glc2-high-mannose N-glycan. | ||
| pfam12819 | Malectin_like | 2.0e-68 | 30 | 364 | 350 | + Carbohydrate-binding protein of the ER. Malectin is a membrane-anchored protein of the endoplasmic reticulum that recognises and binds Glc2-N-glycan. The domain is found on a number of plant receptor kinases. | ||
| PLN03150 | PLN03150 | 0 | 6 | 624 | 623 | + hypothetical protein; Provisional | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005515 | protein binding |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CBI30598.1 | 0 | 25 | 624 | 24 | 624 | unnamed protein product [Vitis vinifera] |
| RefSeq | NP_174156.1 | 0 | 1 | 624 | 1 | 626 | AtRLP4 (Receptor Like Protein 4); protein binding [Arabidopsis thaliana] |
| RefSeq | XP_002279791.1 | 0 | 28 | 624 | 1 | 600 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002305781.1 | 0 | 28 | 624 | 1 | 596 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002509445.1 | 0 | 2 | 624 | 1 | 629 | serine-threonine protein kinase, plant-type, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3rgz_A | 0.00000000000006 | 432 | 546 | 644 | 755 | B Chain B, Structural Basis Of Gibberellin(Ga3)-Induced Della Recognition By The Gibberellin Receptor |
| PDB | 3rgz_A | 0.000000001 | 422 | 512 | 468 | 558 | B Chain B, Structural Basis Of Gibberellin(Ga3)-Induced Della Recognition By The Gibberellin Receptor |
| PDB | 3rgz_A | 0.0000006 | 425 | 510 | 399 | 484 | B Chain B, Structural Basis Of Gibberellin(Ga3)-Induced Della Recognition By The Gibberellin Receptor |
| PDB | 3rgz_A | 0.000006 | 439 | 509 | 195 | 264 | B Chain B, Structural Basis Of Gibberellin(Ga3)-Induced Della Recognition By The Gibberellin Receptor |
| PDB | 3rgz_A | 0.000006 | 432 | 513 | 454 | 535 | B Chain B, Structural Basis Of Gibberellin(Ga3)-Induced Della Recognition By The Gibberellin Receptor |
