Basic Information | |
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Species | Glycine max |
Cazyme ID | Glyma07g39160.1 |
Family | AA1 |
Protein Properties | Length: 548 Molecular Weight: 61959.4 Isoelectric Point: 9.7624 |
Chromosome | Chromosome/Scaffold: 07 Start: 43724501 End: 43729389 |
Description | SKU5 similar 4 |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
AA1 | 49 | 502 | 0 |
KQQGILINGQFPGPQIDAVTNDNLIINVYNYLREPFLISWNGLQHRRNSWQDGVYGTNCPIPPGRNLTYAIQVKDQIGSYFYFPSLGMHKAAGAFGGIRI WSRPLIPVPFPPPAGDFTILAGDWFKLDHRRLRRLLENGHNLPFPDGLLINGRGWNGNTFTVDQGKTYRFRISNVGLTTSINFRIQGHRLKLVEVEGSHT LQNSYSSLDIHLGQSYSVLVTADQPVKDYYIVVSTRFTRRILTTTSVLHYSYSKTGVSGPVPPGPTLDITSSVYQARTIRWNLTASGPRPNPQGSYHYGL IKPSRTIMLANSAPYINGKQRYAVNGVSYNAPDTPLKLADYFNIPGVFYVGSIPTYPNGGNNAYLQTSVMGANFHEFVEIVFQNWEDSVQSWHIDGYSFF VVGFGSGQWTADSRVHYNLRDTVARCTTQVYPRSWTAIYMSLDNVGMWNIRSEN |
Full Sequence |
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Protein Sequence Length: 548 Download |
MRPCKCKCNV LSALILLVTF LFASVHCEDP YRYLTWKVTY GDIYPLGVKQ QGILINGQFP 60 GPQIDAVTND NLIINVYNYL REPFLISWNG LQHRRNSWQD GVYGTNCPIP PGRNLTYAIQ 120 VKDQIGSYFY FPSLGMHKAA GAFGGIRIWS RPLIPVPFPP PAGDFTILAG DWFKLDHRRL 180 RRLLENGHNL PFPDGLLING RGWNGNTFTV DQGKTYRFRI SNVGLTTSIN FRIQGHRLKL 240 VEVEGSHTLQ NSYSSLDIHL GQSYSVLVTA DQPVKDYYIV VSTRFTRRIL TTTSVLHYSY 300 SKTGVSGPVP PGPTLDITSS VYQARTIRWN LTASGPRPNP QGSYHYGLIK PSRTIMLANS 360 APYINGKQRY AVNGVSYNAP DTPLKLADYF NIPGVFYVGS IPTYPNGGNN AYLQTSVMGA 420 NFHEFVEIVF QNWEDSVQSW HIDGYSFFVV GFGSGQWTAD SRVHYNLRDT VARCTTQVYP 480 RSWTAIYMSL DNVGMWNIRS ENWGRQYLGQ QLYLRVYTPS KSWRDEYPVP KNALLCGRAS 540 GRRTRPF* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02991 | PLN02991 | 0 | 12 | 544 | 533 | + oxidoreductase | ||
PLN02835 | PLN02835 | 0 | 10 | 544 | 535 | + oxidoreductase | ||
PLN02792 | PLN02792 | 0 | 15 | 544 | 532 | + oxidoreductase | ||
PLN02354 | PLN02354 | 0 | 10 | 541 | 539 | + copper ion binding / oxidoreductase | ||
PLN02168 | PLN02168 | 0 | 10 | 540 | 543 | + copper ion binding / pectinesterase |
Gene Ontology | |
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GO Term | Description |
GO:0005507 | copper ion binding |
GO:0016491 | oxidoreductase activity |
GO:0055114 | oxidation-reduction process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ABK95805.1 | 0 | 12 | 547 | 9 | 544 | unknown [Populus trichocarpa] |
RefSeq | NP_193932.1 | 0 | 6 | 547 | 5 | 541 | sks4 (SKU5 Similar 4); copper ion binding / oxidoreductase [Arabidopsis thaliana] |
RefSeq | XP_002272880.1 | 0 | 15 | 547 | 9 | 540 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002332613.1 | 0 | 12 | 547 | 9 | 544 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002518462.1 | 0 | 24 | 547 | 19 | 541 | multicopper oxidase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1asq_B | 0 | 32 | 537 | 4 | 539 | A Chain A, Polygalacturonase From Erwinia Carotovora Ssp. Carotovora |
PDB | 1asq_A | 0 | 32 | 537 | 4 | 539 | A Chain A, Polygalacturonase From Erwinia Carotovora Ssp. Carotovora |
PDB | 1asp_B | 0 | 32 | 537 | 4 | 539 | A Chain A, Polygalacturonase From Erwinia Carotovora Ssp. Carotovora |
PDB | 1asp_A | 0 | 32 | 537 | 4 | 539 | A Chain A, Polygalacturonase From Erwinia Carotovora Ssp. Carotovora |
PDB | 1aso_B | 0 | 32 | 537 | 4 | 539 | A Chain A, Polygalacturonase From Erwinia Carotovora Ssp. Carotovora |