| Basic Information | |
|---|---|
| Species | Glycine max |
| Cazyme ID | Glyma07g39160.2 |
| Family | AA1 |
| Protein Properties | Length: 477 Molecular Weight: 53970.9 Isoelectric Point: 9.9774 |
| Chromosome | Chromosome/Scaffold: 07 Start: 43724501 End: 43729389 |
| Description | SKU5 similar 4 |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| AA1 | 13 | 431 | 0 |
| THINWNGLQHRRNSWQDGVYGTNCPIPPGRNLTYAIQVKDQIGSYFYFPSLGMHKAAGAFGGIRIWSRPLIPVPFPPPAGDFTILAGDWFKLDHRRLRRL LENGHNLPFPDGLLINGRGWNGNTFTVDQGKTYRFRISNVGLTTSINFRIQGHRLKLVEVEGSHTLQNSYSSLDIHLGQSYSVLVTADQPVKDYYIVVST RFTRRILTTTSVLHYSYSKTGVSGPVPPGPTLDITSSVYQARTIRWNLTASGPRPNPQGSYHYGLIKPSRTIMLANSAPYINGKQRYAVNGVSYNAPDTP LKLADYFNIPGVFYVGSIPTYPNGGNNAYLQTSVMGANFHEFVEIVFQNWEDSVQSWHIDGYSFFVVGFGSGQWTADSRVHYNLRDTVARCTTQVYPRSW TAIYMSLDNVGMWNIRSEN | |||
| Full Sequence |
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| Protein Sequence Length: 477 Download |
| MAHFSFDTEV FRTHINWNGL QHRRNSWQDG VYGTNCPIPP GRNLTYAIQV KDQIGSYFYF 60 PSLGMHKAAG AFGGIRIWSR PLIPVPFPPP AGDFTILAGD WFKLDHRRLR RLLENGHNLP 120 FPDGLLINGR GWNGNTFTVD QGKTYRFRIS NVGLTTSINF RIQGHRLKLV EVEGSHTLQN 180 SYSSLDIHLG QSYSVLVTAD QPVKDYYIVV STRFTRRILT TTSVLHYSYS KTGVSGPVPP 240 GPTLDITSSV YQARTIRWNL TASGPRPNPQ GSYHYGLIKP SRTIMLANSA PYINGKQRYA 300 VNGVSYNAPD TPLKLADYFN IPGVFYVGSI PTYPNGGNNA YLQTSVMGAN FHEFVEIVFQ 360 NWEDSVQSWH IDGYSFFVVG FGSGQWTADS RVHYNLRDTV ARCTTQVYPR SWTAIYMSLD 420 NVGMWNIRSE NWGRQYLGQQ LYLRVYTPSK SWRDEYPVPK NALLCGRASG RRTRPF* 480 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02168 | PLN02168 | 9.0e-178 | 15 | 469 | 466 | + copper ion binding / pectinesterase | ||
| PLN02835 | PLN02835 | 0 | 15 | 473 | 459 | + oxidoreductase | ||
| PLN02991 | PLN02991 | 0 | 15 | 473 | 459 | + oxidoreductase | ||
| PLN02792 | PLN02792 | 0 | 15 | 473 | 461 | + oxidoreductase | ||
| PLN02354 | PLN02354 | 0 | 15 | 470 | 463 | + copper ion binding / oxidoreductase | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005507 | copper ion binding |
| GO:0016491 | oxidoreductase activity |
| GO:0055114 | oxidation-reduction process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ABK95805.1 | 0 | 15 | 476 | 83 | 544 | unknown [Populus trichocarpa] |
| RefSeq | NP_193932.1 | 0 | 1 | 476 | 68 | 541 | sks4 (SKU5 Similar 4); copper ion binding / oxidoreductase [Arabidopsis thaliana] |
| RefSeq | XP_002272880.1 | 0 | 15 | 476 | 80 | 540 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002332613.1 | 0 | 15 | 476 | 83 | 544 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002518462.1 | 0 | 15 | 476 | 81 | 541 | multicopper oxidase, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1asq_B | 2.00386e-43 | 15 | 466 | 59 | 539 | A Chain A, Polygalacturonase From Erwinia Carotovora Ssp. Carotovora |
| PDB | 1asq_A | 2.00386e-43 | 15 | 466 | 59 | 539 | A Chain A, Polygalacturonase From Erwinia Carotovora Ssp. Carotovora |
| PDB | 1asp_B | 2.00386e-43 | 15 | 466 | 59 | 539 | A Chain A, Polygalacturonase From Erwinia Carotovora Ssp. Carotovora |
| PDB | 1asp_A | 2.00386e-43 | 15 | 466 | 59 | 539 | A Chain A, Polygalacturonase From Erwinia Carotovora Ssp. Carotovora |
| PDB | 1aso_B | 2.00386e-43 | 15 | 466 | 59 | 539 | A Chain A, Polygalacturonase From Erwinia Carotovora Ssp. Carotovora |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| ES811341 | 382 | 99 | 476 | 0 |
| HO801725 | 441 | 34 | 472 | 0 |
| ES814030 | 320 | 114 | 433 | 0 |
| ES824334 | 391 | 91 | 472 | 0 |
| DT338359 | 326 | 140 | 465 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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