y
Basic Information | |
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Species | Glycine max |
Cazyme ID | Glyma08g02920.3 |
Family | GH14 |
Protein Properties | Length: 554 Molecular Weight: 62586.2 Isoelectric Point: 8.5146 |
Chromosome | Chromosome/Scaffold: 08 Start: 2012262 End: 2015968 |
Description | beta-amylase 1 |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH14 | 89 | 509 | 0 |
FVTLPVNSIGRDGRVARPKAMMFSLKALATAGVEGVVIEIWWGLVEKKKPRVYDWRGYEELVAMACKCGLKVRAVLAFHQHGTGPDDPNWMPLPLWVLDE IQKDTELAYCDRFGQRNIEYISLGCDILPVLCGRSPIQAYADFMRNFRDTFESLLGVVITGVQIGMGPGGELRYPSFSSQEPNLAWSHELGEFQCYDKYM LASLNASARNIGKREWGNGGPFGSESLMQNPEHTDFFRNDGGSWDTPYGKFFLEWYSDMLLLHGERICREAETIFRGTEVHISAKLAAIHWHYAMQSHPS ELTAGYYNTSNRDGYLPIARMFSKYGFSMCCSCFEMQDAVTQKINPDGSPEGFLRQLLLVARLCDISLEGQNFSTNLDDGAFTQVLKMSKFYSDGIEKRP FSFNFVRMDKRLFESRNWDRF |
Full Sequence |
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Protein Sequence Length: 554 Download |
MAILSQSTAS FSFVSTRTDS THLTRFPCRV TFRARSPPLR PALVSSRLNS SRSPDAGGSL 60 SPDNGGGDVA YQLHHDFSPQ RRRRGSPVFV TLPVNSIGRD GRVARPKAMM FSLKALATAG 120 VEGVVIEIWW GLVEKKKPRV YDWRGYEELV AMACKCGLKV RAVLAFHQHG TGPDDPNWMP 180 LPLWVLDEIQ KDTELAYCDR FGQRNIEYIS LGCDILPVLC GRSPIQAYAD FMRNFRDTFE 240 SLLGVVITGV QIGMGPGGEL RYPSFSSQEP NLAWSHELGE FQCYDKYMLA SLNASARNIG 300 KREWGNGGPF GSESLMQNPE HTDFFRNDGG SWDTPYGKFF LEWYSDMLLL HGERICREAE 360 TIFRGTEVHI SAKLAAIHWH YAMQSHPSEL TAGYYNTSNR DGYLPIARMF SKYGFSMCCS 420 CFEMQDAVTQ KINPDGSPEG FLRQLLLVAR LCDISLEGQN FSTNLDDGAF TQVLKMSKFY 480 SDGIEKRPFS FNFVRMDKRL FESRNWDRFT RFVRQLSNGN IFRARLNSVR EVRLKTTPVV 540 AAVGLLYHLY QHS* 600 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02905 | PLN02905 | 3.0e-93 | 87 | 516 | 434 | + beta-amylase | ||
PLN02161 | PLN02161 | 9.0e-108 | 78 | 517 | 454 | + beta-amylase | ||
PLN02801 | PLN02801 | 6.0e-117 | 87 | 516 | 442 | + beta-amylase | ||
PLN00197 | PLN00197 | 1.0e-166 | 7 | 547 | 561 | + beta-amylase; Provisional | ||
PLN02803 | PLN02803 | 0 | 1 | 519 | 525 | + beta-amylase |
Gene Ontology | |
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GO Term | Description |
GO:0000272 | polysaccharide catabolic process |
GO:0016161 | beta-amylase activity |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CAN65860.1 | 0 | 1 | 541 | 1 | 541 | hypothetical protein [Vitis vinifera] |
RefSeq | XP_002263816.1 | 0 | 19 | 541 | 124 | 630 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002297961.1 | 0 | 1 | 547 | 1 | 552 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002304568.1 | 0 | 82 | 517 | 1 | 437 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002454872.1 | 0 | 109 | 526 | 1 | 417 | hypothetical protein SORBIDRAFT_03g000480 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1b1y_A | 0 | 88 | 516 | 8 | 435 | A Chain A, Sevenfold Mutant Of Barley Beta-Amylase |
PDB | 2xgi_A | 0 | 88 | 516 | 12 | 439 | A Chain A, Sevenfold Mutant Of Barley Beta-Amylase |
PDB | 2xgb_A | 0 | 88 | 516 | 12 | 439 | A Chain A, Sevenfold Mutant Of Barley Beta-Amylase |
PDB | 2xg9_A | 0 | 88 | 516 | 12 | 439 | A Chain A, Sevenfold Mutant Of Barley Beta-Amylase |
PDB | 2xfy_A | 0 | 88 | 516 | 12 | 439 | A Chain A, Sevenfold Mutant Of Barley Beta-Amylase |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
starch degradation I | RXN-1827 | EC-3.2.1.2 | β-amylase |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
HO784754 | 306 | 23 | 327 | 0 |
HO784754 | 99 | 324 | 422 | 0 |
GT619065 | 265 | 138 | 402 | 0 |
EV266124 | 233 | 217 | 449 | 0 |
HO784754 | 120 | 368 | 485 | 0.0000000000006 |
Sequence Alignments (This image is cropped. Click for full image.) |
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