| Basic Information | |
|---|---|
| Species | Glycine max |
| Cazyme ID | Glyma08g03700.1 |
| Family | CE8 |
| Protein Properties | Length: 376 Molecular Weight: 41250.2 Isoelectric Point: 9.4305 |
| Chromosome | Chromosome/Scaffold: 08 Start: 2624660 End: 2628335 |
| Description | Pectin lyase-like superfamily protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| CE8 | 82 | 366 | 0 |
| VSKKHGKGGFSSIQAAIDSLPFINVVRVVIKVHAGVYTEKVNISPFKSFVTIQGEGADKTIVQWGDTAQSQPLGTYGSATFAVNSPYFIAKNITFKNTAP IPAPGAVGKQGVALRISADTAVFLGCKFLGAQDTLYDHIGRHYYKDCYIEGSVDFIFGNALSLFEGCHVHAIAQLTGALTAQGRNSLLEDTGFSFVHCKV TGSGALYLGRAWGPFSRVVFAYTYMDNIIIPKGWYNWGDPNREMTVFYGQYKCTGPGASYAGRVSWSRELSDEEAKPFISLSYID | |||
| Full Sequence |
|---|
| Protein Sequence Length: 376 Download |
| MSNLHFIFYG LVVILFLQNP SATQCHTKGI RPKPGNGLST NMTRVEFSEQ QFMKWVKFVG 60 GLKHSVFRTA KNKLFPSHTL HVSKKHGKGG FSSIQAAIDS LPFINVVRVV IKVHAGVYTE 120 KVNISPFKSF VTIQGEGADK TIVQWGDTAQ SQPLGTYGSA TFAVNSPYFI AKNITFKNTA 180 PIPAPGAVGK QGVALRISAD TAVFLGCKFL GAQDTLYDHI GRHYYKDCYI EGSVDFIFGN 240 ALSLFEGCHV HAIAQLTGAL TAQGRNSLLE DTGFSFVHCK VTGSGALYLG RAWGPFSRVV 300 FAYTYMDNII IPKGWYNWGD PNREMTVFYG QYKCTGPGAS YAGRVSWSRE LSDEEAKPFI 360 SLSYIDGSEW INLSL* 420 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02634 | PLN02634 | 5.0e-113 | 6 | 371 | 372 | + probable pectinesterase | ||
| PLN02432 | PLN02432 | 3.0e-113 | 87 | 371 | 285 | + putative pectinesterase | ||
| PLN02304 | PLN02304 | 4.0e-115 | 85 | 371 | 295 | + probable pectinesterase | ||
| PLN02665 | PLN02665 | 2.0e-122 | 84 | 371 | 290 | + pectinesterase family protein | ||
| PLN02682 | PLN02682 | 0 | 11 | 373 | 368 | + pectinesterase family protein | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005618 | cell wall |
| GO:0030599 | pectinesterase activity |
| GO:0042545 | cell wall modification |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CAN63186.1 | 0 | 11 | 373 | 10 | 379 | hypothetical protein [Vitis vinifera] |
| RefSeq | NP_001044216.1 | 0 | 12 | 373 | 12 | 384 | Os01g0743200 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | NP_197474.1 | 0 | 21 | 373 | 24 | 383 | pectinesterase family protein [Arabidopsis thaliana] |
| RefSeq | XP_002330522.1 | 0 | 1 | 373 | 1 | 381 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002514210.1 | 0 | 1 | 373 | 1 | 383 | Pectinesterase PPE8B precursor, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1gq8_A | 0 | 82 | 371 | 10 | 308 | A Chain A, Pectin Methylesterase From Carrot |
| PDB | 1xg2_A | 5.60519e-45 | 82 | 371 | 6 | 304 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 3uw0_A | 6e-28 | 91 | 359 | 44 | 352 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |
| PDB | 2ntq_B | 2e-18 | 82 | 359 | 8 | 328 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |
| PDB | 2ntq_A | 2e-18 | 82 | 359 | 8 | 328 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| homogalacturonan degradation | RXN-2102 | EC-3.1.1.11 | pectinesterase |
