| Basic Information | |
|---|---|
| Species | Glycine max |
| Cazyme ID | Glyma08g08740.2 |
| Family | GT5 |
| Protein Properties | Length: 991 Molecular Weight: 111869 Isoelectric Point: 5.5835 |
| Chromosome | Chromosome/Scaffold: 08 Start: 6248790 End: 6257979 |
| Description | starch synthase 4 |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GT5 | 493 | 977 | 0 |
| HVIHIAAEMAPVAKVGGLGDVVSGLGKALQKKGHLVEIVLPKYDCMQYDRVCDLRALDVLIDSYFDRQLYKNKIWVGTVEGLPVYFIEPHHPDKFFWRGE FYGERDDFRRFSFFSRAALEFLLRAGKKPDIIHCHDWQTAFIAPLYWEIFAPKKGLNSARICFTCHNFEYQGTAAASELESCGLESHRLNRKDRMQDNSS HDRVNSVKGGIVFSNIVTTVSPTYAQEVRTEEGGRGLHSTLSVHSKKLIGIINGIDTDAWNPATDAFLPVQYNATDLQGKAENKQALGRNLGLSSTDVRR PLVGCITRLVPQKGVHLIRHAIYLTLELGGQFVLLGSSPVPHIQKEFEGIANHFQNHDHIRLILKYDESLSHAIYAASDMFIIPSIFEPCGLTQMISMRY GAIPIVRKTGGLNDSVFDVDDDTIPSQFRNGFTFVNADEQGLNGALVRAFNLFNNNPEGWKQLVQKDMNIDFSWETSSAQYEELY | |||
| Full Sequence |
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| Protein Sequence Length: 991 Download |
| MASKLRTCFM CWNLSGFNCV NHHNGRNRVV RVSFPASCEM RHRATFSSQH KRQQIKPSAE 60 GGLRQNQDEE DDAAEVSLNN DDSVENLNDA TAPLAINING AEQAEQLSGR QLEDLLGMIK 120 NAEKNILLLN EARVRSLEDL EKILAEKEAL QGEINVLETR LAETDAQIKV ANQEKIHVEL 180 LEGQLEKLRN ELAQKESTEG KYSELHDLQN GGLSDANPLS HNDSIHSLTE ELNSLRAENA 240 SLKNTIESFK TQLSDTKNND ERLVALEKER SSLESALKDL ESKLSISQDD VSKISTLTVE 300 YKDLWDKVEN LQSLLDKATK QADQAVIVLQ QNQDLRRKVD KLEESLEEAN IYKLSSDKLQ 360 KYSELMQQKL KLLEDRLQKT DEEINSYVQL YQQSVKEFQD TLDTLKEESK KGNLEEPVED 420 MPWEFWSQLL LLIDGWKLEK KISVDDASLL REKVWKRDRR IIDTYIACKK QSEQEAISAF 480 LGLLSSATSP GLHVIHIAAE MAPVAKVGGL GDVVSGLGKA LQKKGHLVEI VLPKYDCMQY 540 DRVCDLRALD VLIDSYFDRQ LYKNKIWVGT VEGLPVYFIE PHHPDKFFWR GEFYGERDDF 600 RRFSFFSRAA LEFLLRAGKK PDIIHCHDWQ TAFIAPLYWE IFAPKKGLNS ARICFTCHNF 660 EYQGTAAASE LESCGLESHR LNRKDRMQDN SSHDRVNSVK GGIVFSNIVT TVSPTYAQEV 720 RTEEGGRGLH STLSVHSKKL IGIINGIDTD AWNPATDAFL PVQYNATDLQ GKAENKQALG 780 RNLGLSSTDV RRPLVGCITR LVPQKGVHLI RHAIYLTLEL GGQFVLLGSS PVPHIQKEFE 840 GIANHFQNHD HIRLILKYDE SLSHAIYAAS DMFIIPSIFE PCGLTQMISM RYGAIPIVRK 900 TGGLNDSVFD VDDDTIPSQF RNGFTFVNAD EQGLNGALVR AFNLFNNNPE GWKQLVQKDM 960 NIDFSWETSS AQYEELYLKS VARAKAAKGA * 1020 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02316 | PLN02316 | 2.0e-128 | 485 | 977 | 500 | + synthase/transferase | ||
| PRK00654 | glgA | 6.0e-175 | 492 | 977 | 491 | + glycogen synthase; Provisional | ||
| cd03791 | GT1_Glycogen_synthase_DULL1_like | 2.0e-179 | 493 | 977 | 487 | + This family is most closely related to the GT1 family of glycosyltransferases. Glycogen synthase catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms. | ||
| PLN02939 | PLN02939 | 0 | 1 | 987 | 1010 | + transferase, transferring glycosyl groups | ||
| TIGR02095 | glgA | 0 | 492 | 977 | 489 | + glycogen/starch synthase, ADP-glucose type. This family consists of glycogen (or starch) synthases that use ADP-glucose (EC 2.4.1.21), rather than UDP-glucose (EC 2.4.1.11) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate [Energy metabolism, Biosynthesis and degradation of polysaccharides]. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0009058 | biosynthetic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CAA16796.1 | 0 | 1 | 987 | 1 | 1067 | starch synthase-like protein [Arabidopsis thaliana] |
| EMBL | CAB40375.1 | 0 | 118 | 990 | 1 | 874 | starch synthase, isoform V [Vigna unguiculata] |
| RefSeq | NP_193558.3 | 0 | 1 | 987 | 1 | 1036 | ATSS4; transferase, transferring glycosyl groups [Arabidopsis thaliana] |
| RefSeq | XP_002274716.1 | 0 | 1 | 987 | 1 | 1008 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002298514.1 | 0 | 94 | 987 | 17 | 884 | predicted protein [Populus trichocarpa] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1rzv_B | 0 | 492 | 984 | 1 | 479 | A Chain A, Crystal Structure Of The Glycogen Synthase From Agrobacterium Tumefaciens (Non-Complexed Form) |
| PDB | 1rzv_A | 0 | 492 | 984 | 1 | 479 | A Chain A, Crystal Structure Of The Glycogen Synthase From Agrobacterium Tumefaciens (Non-Complexed Form) |
| PDB | 1rzu_B | 0 | 492 | 984 | 1 | 479 | A Chain A, Crystal Structure Of The Glycogen Synthase From A. Tumefaciens In Complex With Adp |
| PDB | 1rzu_A | 0 | 492 | 984 | 1 | 479 | A Chain A, Crystal Structure Of The Glycogen Synthase From A. Tumefaciens In Complex With Adp |
| PDB | 3d1j_A | 0 | 492 | 979 | 1 | 475 | A Chain A, Crystal Structure Of E.Coli Gs Mutant Dmgs(C7s;c40 |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| starch biosynthesis | GLYCOGENSYN-RXN | EC-2.4.1.21 | starch synthase |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| CF828776 | 286 | 618 | 903 | 0 |
| GO851132 | 334 | 567 | 900 | 0 |
| GW865616 | 279 | 618 | 896 | 0 |
| GR826552 | 228 | 754 | 981 | 0 |
| CB893818 | 282 | 491 | 772 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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