Basic Information | |
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Species | Glycine max |
Cazyme ID | Glyma08g11810.1 |
Family | CBM43 |
Protein Properties | Length: 193 Molecular Weight: 19648.1 Isoelectric Point: 5.5605 |
Chromosome | Chromosome/Scaffold: 08 Start: 8601803 End: 8605938 |
Description | Carbohydrate-binding X8 domain superfamily protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM43 | 31 | 112 | 7.3e-34 |
WCVARSDASSDALQTALDYACGAGGDCLPLQPDGLCFLPNTIQAHASYAFNSYYQRRTRAPGSCDFAATATIATSDPSYGSC |
Full Sequence |
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Protein Sequence Length: 193 Download |
MAAPKLVPLL LLLTIITTTK NVLGQGGTAS WCVARSDASS DALQTALDYA CGAGGDCLPL 60 QPDGLCFLPN TIQAHASYAF NSYYQRRTRA PGSCDFAATA TIATSDPSYG SCVYPSSASA 120 AGGPNTPTTT PPMNNPNVPT STTTTPIFGG GNTGGLTPGM STPFPDSSRA HSEATATWFL 180 ALCSSLIIFI IS* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam07983 | X8 | 1.0e-18 | 30 | 101 | 77 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
smart00768 | X8 | 1.0e-34 | 30 | 114 | 85 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ACU14573.1 | 0 | 26 | 187 | 24 | 191 | unknown [Glycine max] |
GenBank | ACU17645.1 | 0 | 1 | 192 | 1 | 191 | unknown [Glycine max] |
RefSeq | NP_193096.5 | 0 | 8 | 191 | 38 | 231 | unknown protein [Arabidopsis thaliana] |
RefSeq | XP_002267551.1 | 0 | 19 | 182 | 39 | 201 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002518089.1 | 1.4013e-45 | 10 | 117 | 7 | 113 | hydrolase, hydrolyzing O-glycosyl compounds, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2jon_A | 5e-26 | 30 | 119 | 12 | 101 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |