y
Basic Information | |
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Species | Glycine max |
Cazyme ID | Glyma08g13690.1 |
Family | CBM43 |
Protein Properties | Length: 176 Molecular Weight: 18906.7 Isoelectric Point: 6.8716 |
Chromosome | Chromosome/Scaffold: 08 Start: 10016299 End: 10020093 |
Description | Carbohydrate-binding X8 domain superfamily protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM43 | 54 | 136 | 2.3e-34 |
WCVALAGVSQADLQNALDWACGLGMADCTAIQHGGPCFEPDTLVSHASFAFNSYYQINGNSDIACNFGGTAALTKHNPSYGKC |
Full Sequence |
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Protein Sequence Length: 176 Download |
MRNKMCLFLF LFFMECYLAT ARGIVVQQKS EAAIPVTTLS PPEGNTTFID GTTWCVALAG 60 VSQADLQNAL DWACGLGMAD CTAIQHGGPC FEPDTLVSHA SFAFNSYYQI NGNSDIACNF 120 GGTAALTKHN PSYGKCVYST SGSLVASAPP SLRKHNQNLV WSKLAALLLL SYFWM* 180 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam07983 | X8 | 2.0e-22 | 53 | 124 | 77 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
smart00768 | X8 | 2.0e-39 | 53 | 138 | 86 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ACJ85566.1 | 0 | 1 | 175 | 1 | 178 | unknown [Medicago truncatula] |
GenBank | ACU17215.1 | 0 | 1 | 175 | 1 | 175 | unknown [Glycine max] |
EMBL | CBI30973.1 | 0 | 1 | 167 | 549 | 714 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002274294.1 | 0 | 25 | 132 | 4 | 111 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002526606.1 | 0 | 22 | 133 | 2 | 113 | hydrolase, hydrolyzing O-glycosyl compounds, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2jon_A | 3e-19 | 53 | 140 | 12 | 98 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |