Basic Information | |
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Species | Glycine max |
Cazyme ID | Glyma08g17511.1 |
Family | CBM43 |
Protein Properties | Length: 154 Molecular Weight: 16249.3 Isoelectric Point: 4.3465 |
Chromosome | Chromosome/Scaffold: 08 Start: 13006517 End: 13007702 |
Description | Carbohydrate-binding X8 domain superfamily protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM43 | 67 | 148 | 3.5e-34 |
WCVAKPSVPDPIIQEAMNYACWSGADCTSIQPNGPCYEPNTVYAHASYAFNSYWQRTKGAGGNCEFGGTAMLVAVDPSFDGC |
Full Sequence |
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Protein Sequence Length: 154 Download |
MGPPYFEPTP PFIIPSPTGG ITPGPPSTVP SPTEGTVPSP SVFQPPVVYP PPSVPPPPNY 60 APRTTLWCVA KPSVPDPIIQ EAMNYACWSG ADCTSIQPNG PCYEPNTVYA HASYAFNSYW 120 QRTKGAGGNC EFGGTAMLVA VDPSFDGCHF IYN* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam07983 | X8 | 7.0e-24 | 66 | 137 | 77 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
smart00768 | X8 | 8.0e-40 | 66 | 150 | 85 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CBI34142.1 | 0 | 59 | 153 | 159 | 253 | unnamed protein product [Vitis vinifera] |
RefSeq | NP_001117621.1 | 0 | 13 | 152 | 248 | 395 | unknown protein [Arabidopsis thaliana] |
RefSeq | NP_178066.2 | 0 | 13 | 152 | 249 | 396 | unknown protein [Arabidopsis thaliana] |
RefSeq | XP_002312230.1 | 0 | 29 | 144 | 178 | 292 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002516415.1 | 0 | 66 | 153 | 176 | 263 | conserved hypothetical protein [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2jon_A | 2e-21 | 67 | 150 | 13 | 96 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
CF373123 | 94 | 61 | 154 | 5.60519e-45 |
CK297659 | 90 | 64 | 153 | 7.00649e-45 |
GR029881 | 89 | 64 | 152 | 1.96182e-44 |
GR029880 | 89 | 64 | 152 | 1.96182e-44 |
CF604722 | 91 | 62 | 152 | 2.94273e-44 |
Sequence Alignments (This image is cropped. Click for full image.) |
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