| Basic Information | |
|---|---|
| Species | Glycine max |
| Cazyme ID | Glyma08g22160.2 |
| Family | GT4 |
| Protein Properties | Length: 688 Molecular Weight: 77621.1 Isoelectric Point: 10.2271 |
| Chromosome | Chromosome/Scaffold: 08 Start: 16828854 End: 16833036 |
| Description | UDP-Glycosyltransferase superfamily protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GT4 | 536 | 656 | 1.1e-21 |
| VGSKSNKVDYVKGLLSFLARHSNLSKSVLWTSATIRVAALYFAADVYVINSQGLGETFGRVTIEAMAFGLPVLGTDAGGTQEIVEHNVTGLLHPIGRAGN HVLAQNLRFLLENRLTREQMG | |||
| Full Sequence |
|---|
| Protein Sequence Length: 688 Download |
| MEDCNNKGEV HAHLTKQKQS SSRSAISLKA TLSGRLSPQH SPSFQRPYST LAARRESNRL 60 LLWLLLITLW AYLGFCVQSR WAHDDKEGEF SGFGSSQGDT SKTNYYAEQN QHHDLIAKNI 120 SLSVNIKLVE NKTIDVSLAN KEYSVLSQLK ASSKKRNRRK RSTHALRGKR RRKHILLESS 180 GIEEQEPEIP LRNDTYGFLV GPFGSIEDRI LQLSPQRRYE TCDKKGEFAR LVWSRRFVLI 240 FHELSMTGAP LSMMELATEL LSCGASVSAV VLSRKGGLMQ ELARRRIKVL DDKAYLSFKI 300 AKKSDLVIAG SAVCASWIEQ YIEHFPAGAS QVAWWIMENR REYFDRAKDV LQRVNTLVFL 360 SESQSRQWQK WCEEEGIKLS SQLAIVPLSV NDELAFVAGI PSTLNALSFS AAKMDERRKL 420 LRDSVRREMA LNDNDMLVMT LSSINRGKGQ LLLLESAHSI VEHGPLQDDD KKMQKSSDDG 480 EYLSTLARRH HFRNLLKDNS VALNNISSNF INRTRKVFSQ NNGTIAQSLK ILIGSVGSKS 540 NKVDYVKGLL SFLARHSNLS KSVLWTSATI RVAALYFAAD VYVINSQGLG ETFGRVTIEA 600 MAFGLPVLGT DAGGTQEIVE HNVTGLLHPI GRAGNHVLAQ NLRFLLENRL TREQMGMEGR 660 KKVQRMFLKQ HMYEKFVEVL VMCMRRI* 720 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| TIGR00009 | L28 | 2.0e-18 | 572 | 665 | 94 | + ribosomal protein L28. This model describes bacterial and chloroplast forms of the 50S ribosomal protein L28, a polypeptide about 60 amino acids in length. Mitochondrial homologs differ substantially in architecture and are not included [Protein synthesis, Ribosomal proteins: synthesis and modification]. | ||
| cd03798 | GT1_wlbH_like | 1.0e-19 | 553 | 680 | 130 | + This family is most closely related to the GT1 family of glycosyltransferases. wlbH in Bordetella parapertussis has been shown to be required for the biosynthesis of a trisaccharide that, when attached to the B. pertussis lipopolysaccharide (LPS) core (band B), generates band A LPS. | ||
| cd03808 | GT1_cap1E_like | 2.0e-21 | 572 | 678 | 107 | + This family is most closely related to the GT1 family of glycosyltransferases. cap1E in Streptococcus pneumoniae is required for the synthesis of type 1 capsular polysaccharides. | ||
| cd03801 | GT1_YqgM_like | 2.0e-25 | 553 | 680 | 130 | + This family is most closely related to the GT1 family of glycosyltransferases and named after YqgM in Bacillus licheniformis about which little is known. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found mainly in certain bacteria and archaea. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0009058 | biosynthetic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CAN71826.1 | 0 | 1 | 685 | 1 | 732 | hypothetical protein [Vitis vinifera] |
| EMBL | CBI36173.1 | 0 | 1 | 685 | 1 | 681 | unnamed protein product [Vitis vinifera] |
| RefSeq | XP_002284822.1 | 0 | 18 | 685 | 5 | 689 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002298139.1 | 0 | 1 | 685 | 1 | 679 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002528176.1 | 0 | 1 | 685 | 1 | 684 | glycosyltransferase, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 2jjm_L | 0.00000006 | 553 | 676 | 259 | 378 | A Chain A, Crystal Structure Of A Family Gt4 Glycosyltransferase From Bacillus Anthracis Orf Ba1558. |
| PDB | 2jjm_K | 0.00000006 | 553 | 676 | 259 | 378 | A Chain A, Crystal Structure Of A Family Gt4 Glycosyltransferase From Bacillus Anthracis Orf Ba1558. |
| PDB | 2jjm_J | 0.00000006 | 553 | 676 | 259 | 378 | A Chain A, Crystal Structure Of A Family Gt4 Glycosyltransferase From Bacillus Anthracis Orf Ba1558. |
| PDB | 2jjm_I | 0.00000006 | 553 | 676 | 259 | 378 | A Chain A, Crystal Structure Of A Family Gt4 Glycosyltransferase From Bacillus Anthracis Orf Ba1558. |
| PDB | 2jjm_H | 0.00000006 | 553 | 676 | 259 | 378 | A Chain A, Crystal Structure Of A Family Gt4 Glycosyltransferase From Bacillus Anthracis Orf Ba1558. |
