y
Basic Information | |
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Species | Glycine max |
Cazyme ID | Glyma08g42200.1 |
Family | CBM43 |
Protein Properties | Length: 257 Molecular Weight: 27230.4 Isoelectric Point: 8.3809 |
Chromosome | Chromosome/Scaffold: 08 Start: 42152946 End: 42157507 |
Description | Carbohydrate-binding X8 domain superfamily protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM43 | 112 | 194 | 1.8e-33 |
WCTASPTSSQRALQVGLDYACGYGGTDCSAIQPGGSCYFPNSVRDHASYAFNKYYQKNPVPNSCNFGGAAVITSTNPSTGACQ |
Full Sequence |
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Protein Sequence Length: 257 Download |
MERSVYYYVL LLVFGHFLCS GSSRTQKEAA RHMNVLRHNE EKQHEFTASK STTQRDITTP 60 ITTIPNLVPI TSTNPILNPN SNPDTVSPAS TLPITTPTMP NNSPVSSSGA SWCTASPTSS 120 QRALQVGLDY ACGYGGTDCS AIQPGGSCYF PNSVRDHASY AFNKYYQKNP VPNSCNFGGA 180 AVITSTNPST GACQYASTSI SSSVLNTTNT SGANVFGSVP VPKNPSASVA AAATSARFVQ 240 FCLILWSLAM LDKNYL* 300 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam07983 | X8 | 1.0e-20 | 111 | 182 | 78 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
smart00768 | X8 | 3.0e-34 | 111 | 195 | 86 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | EEC79758.1 | 9.80909e-45 | 14 | 208 | 18 | 205 | hypothetical protein OsI_21142 [Oryza sativa Indica Group] |
GenBank | EEE64827.1 | 2.94273e-44 | 14 | 208 | 18 | 205 | hypothetical protein OsJ_19684 [Oryza sativa Japonica Group] |
RefSeq | NP_001031450.1 | 8.00141e-43 | 87 | 250 | 58 | 224 | unknown protein [Arabidopsis thaliana] |
RefSeq | XP_002283721.1 | 0 | 1 | 217 | 1 | 204 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002441577.1 | 7.00649e-45 | 38 | 208 | 19 | 170 | hypothetical protein SORBIDRAFT_09g029700 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2jon_A | 1e-17 | 103 | 199 | 4 | 100 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |