Basic Information | |
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Species | Glycine max |
Cazyme ID | Glyma08g42200.2 |
Family | CBM43 |
Protein Properties | Length: 241 Molecular Weight: 26305.7 Isoelectric Point: 9.3374 |
Chromosome | Chromosome/Scaffold: 08 Start: 42152946 End: 42157507 |
Description | Carbohydrate-binding X8 domain superfamily protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM43 | 112 | 191 | 7e-32 |
WCTASPTSSQRALQVGLDYACGYGGTDCSAIQPGGSCYFPNSVRDHASYAFNKYYQKNPVPNSCNFGGAAVITSTNPRTK |
Full Sequence |
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Protein Sequence Length: 241 Download |
MERSVYYYVL LLVFGHFLCS GSSRTQKEAA RHMNVLRHNE EKQHEFTASK STTQRDITTP 60 ITTIPNLVPI TSTNPILNPN SNPDTVSPAS TLPITTPTMP NNSPVSSSGA SWCTASPTSS 120 QRALQVGLDY ACGYGGTDCS AIQPGGSCYF PNSVRDHASY AFNKYYQKNP VPNSCNFGGA 180 AVITSTNPRT KKVPLSDARS QAFFFFYFIR ERISKASYIL SISKVLGHVN MHPLVLVHQS 240 * |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam07983 | X8 | 2.0e-22 | 111 | 182 | 78 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
smart00768 | X8 | 4.0e-33 | 111 | 188 | 79 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
RefSeq | XP_002283721.1 | 3e-39 | 1 | 188 | 1 | 175 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002300880.1 | 2e-38 | 109 | 188 | 1 | 80 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002331855.1 | 1e-37 | 110 | 188 | 1 | 79 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002441577.1 | 7e-38 | 38 | 191 | 19 | 153 | hypothetical protein SORBIDRAFT_09g029700 [Sorghum bicolor] |
RefSeq | XP_002519744.1 | 2e-39 | 19 | 188 | 15 | 191 | hydrolase, hydrolyzing O-glycosyl compounds, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2jon_A | 0.00000000000002 | 103 | 188 | 4 | 89 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |