y
Basic Information | |
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Species | Glycine max |
Cazyme ID | Glyma08g45210.1 |
Family | GT35 |
Protein Properties | Length: 847 Molecular Weight: 95827 Isoelectric Point: 6.3871 |
Chromosome | Chromosome/Scaffold: 08 Start: 44622012 End: 44630245 |
Description | alpha-glucan phosphorylase 2 |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT35 | 121 | 841 | 0 |
ALRKFGLELEEIAEQEKDAALGNGGLGRLASCFLDSMATLNLPSWGYGLRYRYGLFKQRITREGQEEVAEDWLEKFSPWEVVRHDILYPIRFFGHVEVNP DGSRKWVGGEVVQALAYDVPIPGYQTKNTISLRLWEAKASAEDFNLFLFNDGQHDAASVLHSRAQQICAVLYPGDTTEGGKLLRLKQQFFLCSASLQDII SRFKERRQGPWNWSEFPTKVAVQLNDTHPTLAIPELMRLLMDDEGLGWDEAWDVTSKTIAYTNHTVLPEALEKWSQPVMWKLLPRHMEIIQEIDKRFTAM INTTRLDLENELSAMRILDDNPQKPVVRMANLCVVSSHAVNGVAQLHSDILKSELFANYVSIWPTKFQNKTNGITPRRWLQFCNPELGGIITKWLKTDKW VTNLDLLTGLRQFADNEDLQAEWLSAKMASKQRLARYVLQVTGESIDPDTLFDIQVKRIHEYKRQLLNILGVIYRYKKLKEMSLEERKNTTPRTVMIGGK AFATYTNAIRIVRLVNDVGAVVNSDPEVNGYLKVVFVPNYNVSVAEVLIPGSELSQHISTAGMEASGTSNMKFALNGCLIIGTLDGANVEIREEIGEDNF FLFGATAEDVPRLRKERENGLFKPDPRFEEAKKFIRSGVFGSYDYNPLLESLEGNSGYGRGDYFLVGHDFPSYMDTQAKVDEAYRDRKRWLKMSILSTAG SGKFSSDRTIAQYAKEIWNIE |
Full Sequence |
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Protein Sequence Length: 847 Download |
MAAKVDANGG GGKGGVSAVS AKVPAVAHPL AEKPDEVASN ISYHAQFSPH FSPFKFELEQ 60 AYYATAESVR DRLIRQWNET YLHFHKVDPK QTYYLSMEFL QGRALTNAIG NLNIQDAYAN 120 ALRKFGLELE EIAEQEKDAA LGNGGLGRLA SCFLDSMATL NLPSWGYGLR YRYGLFKQRI 180 TREGQEEVAE DWLEKFSPWE VVRHDILYPI RFFGHVEVNP DGSRKWVGGE VVQALAYDVP 240 IPGYQTKNTI SLRLWEAKAS AEDFNLFLFN DGQHDAASVL HSRAQQICAV LYPGDTTEGG 300 KLLRLKQQFF LCSASLQDII SRFKERRQGP WNWSEFPTKV AVQLNDTHPT LAIPELMRLL 360 MDDEGLGWDE AWDVTSKTIA YTNHTVLPEA LEKWSQPVMW KLLPRHMEII QEIDKRFTAM 420 INTTRLDLEN ELSAMRILDD NPQKPVVRMA NLCVVSSHAV NGVAQLHSDI LKSELFANYV 480 SIWPTKFQNK TNGITPRRWL QFCNPELGGI ITKWLKTDKW VTNLDLLTGL RQFADNEDLQ 540 AEWLSAKMAS KQRLARYVLQ VTGESIDPDT LFDIQVKRIH EYKRQLLNIL GVIYRYKKLK 600 EMSLEERKNT TPRTVMIGGK AFATYTNAIR IVRLVNDVGA VVNSDPEVNG YLKVVFVPNY 660 NVSVAEVLIP GSELSQHIST AGMEASGTSN MKFALNGCLI IGTLDGANVE IREEIGEDNF 720 FLFGATAEDV PRLRKERENG LFKPDPRFEE AKKFIRSGVF GSYDYNPLLE SLEGNSGYGR 780 GDYFLVGHDF PSYMDTQAKV DEAYRDRKRW LKMSILSTAG SGKFSSDRTI AQYAKEIWNI 840 EECRVP* 900 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
cd04300 | GT1_Glycogen_Phosphorylase | 0 | 38 | 840 | 811 | + This is a family of oligosaccharide phosphorylases. It includes yeast and mammalian glycogen phosphorylases, plant starch/glucan phosphorylase, as well as the maltodextrin phosphorylases of bacteria. The members of this family catalyze the breakdown of oligosaccharides into glucose-1-phosphate units. They are important allosteric enzymes in carbohydrate metabolism. The allosteric control mechanisms of yeast and mammalian members of this family are different from that of bacterial members. The members of this family belong to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. | ||
TIGR02093 | P_ylase | 0 | 41 | 840 | 808 | + glycogen/starch/alpha-glucan phosphorylases. This family consists of phosphorylases. Members use phosphate to break alpha 1,4 linkages between pairs of glucose residues at the end of long glucose polymers, releasing alpha-D-glucose 1-phosphate. The nomenclature convention is to preface the name according to the natural substrate, as in glycogen phosphorylase, starch phosphorylase, maltodextrin phosphorylase, etc. Name differences among these substrates reflect differences in patterns of branching with alpha 1,6 linkages. Members include allosterically regulated and unregulated forms. A related family, TIGR02094, contains examples known to act well on particularly small alpha 1,4 glucans, as may be found after import from exogenous sources [Energy metabolism, Biosynthesis and degradation of polysaccharides]. | ||
pfam00343 | Phosphorylase | 0 | 121 | 842 | 727 | + Carbohydrate phosphorylase. The members of this family catalyze the formation of glucose 1-phosphate from one of the following polyglucoses; glycogen, starch, glucan or maltodextrin. | ||
COG0058 | GlgP | 0 | 33 | 841 | 813 | + Glucan phosphorylase [Carbohydrate transport and metabolism] | ||
PRK14985 | PRK14985 | 0 | 94 | 838 | 755 | + maltodextrin phosphorylase; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0004645 | phosphorylase activity |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
DDBJ | BAG31926.1 | 0 | 3 | 846 | 2 | 843 | alpha-1,4-glucan phosphorylase H isozyme [Cucurbita maxima] |
Swiss-Prot | P53537 | 0 | 1 | 846 | 1 | 842 | PHSH_VICFA RecName: Full=Alpha-glucan phosphorylase, H isozyme; AltName: Full=Starch phosphorylase H |
RefSeq | XP_002280732.1 | 0 | 1 | 846 | 1 | 843 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002313399.1 | 0 | 3 | 846 | 4 | 853 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002520435.1 | 0 | 1 | 846 | 1 | 849 | glycogen phosphorylase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1ygp_B | 0 | 61 | 841 | 68 | 876 | A Chain A, Phosphorylated Form Of Yeast Glycogen Phosphorylase With Phosphate Bound In The Active Site. |
PDB | 1ygp_A | 0 | 61 | 841 | 68 | 876 | A Chain A, Phosphorylated Form Of Yeast Glycogen Phosphorylase With Phosphate Bound In The Active Site. |
PDB | 1z8d_A | 0 | 62 | 844 | 53 | 832 | A Chain A, Crystal Structure Of Human Muscle Glycogen Phosphorylase A With Amp And Glucose |
PDB | 2gj4_A | 0 | 31 | 844 | 10 | 820 | A Chain A, Structure Of Rabbit Muscle Glycogen Phosphorylase In Complex With Ligand |
PDB | 4el5_A | 0 | 62 | 844 | 41 | 820 | A Chain A, Structure Of Rabbit Muscle Glycogen Phosphorylase In Complex With Ligand |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
starch degradation I | RXN-1826 | EC-2.4.1.1 | phosphorylase |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
HO782200 | 410 | 177 | 586 | 0 |
HO418036 | 540 | 247 | 762 | 0 |
HO801570 | 317 | 28 | 344 | 0 |
HO801468 | 290 | 194 | 483 | 0 |
HO801468 | 111 | 84 | 194 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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