| Basic Information | |
|---|---|
| Species | Glycine max |
| Cazyme ID | Glyma08g46110.1 |
| Family | CBM43 |
| Protein Properties | Length: 468 Molecular Weight: 51377.1 Isoelectric Point: 9.7053 |
| Chromosome | Chromosome/Scaffold: 08 Start: 45302723 End: 45305837 |
| Description | O-Glycosyl hydrolases family 17 protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| CBM43 | 378 | 461 | 4.4e-28 |
| WCVAARPHNATALAAALAYACSQGNGTCDPIQPKGKCFKPDSVFWHASYAFSAYWAQFRKVGGTCYFNGLATQTAKDPSYGSCK | |||
| GH17 | 30 | 351 | 0 |
| GICYGQLGDNLPPPQKSVSLITSLHAKRVKLYDANPAILHALRDTSLQVSIMVPNDLIVNISRNQSLSDKWVSDNVVPYHPRTLIRYLLVGNEVTSSTAP NGTWPYLVPAMRRIKHSLKSLGIRKVKVGTSSAIDVLEASFPPSNGAFRKDLSAPVMKPMLKFLNRTKSFFFLDVYPFFSWSADPLNINLDYALFQSKNL TVTDPGTGLVYTNLFDQMVDAVYFAMNRLGFPGVRIFIAETGWPNGGDLDQIGANIFNAATYNRNFIKKVTRKPWLGTPARPGSALPSFLFALFNENQKP GPGTERHFGLLHPNGSRVYDVD | |||
| Full Sequence |
|---|
| Protein Sequence Length: 468 Download |
| MAMLLLIPLF LSSIALFTIS SATTFSTHPG ICYGQLGDNL PPPQKSVSLI TSLHAKRVKL 60 YDANPAILHA LRDTSLQVSI MVPNDLIVNI SRNQSLSDKW VSDNVVPYHP RTLIRYLLVG 120 NEVTSSTAPN GTWPYLVPAM RRIKHSLKSL GIRKVKVGTS SAIDVLEASF PPSNGAFRKD 180 LSAPVMKPML KFLNRTKSFF FLDVYPFFSW SADPLNINLD YALFQSKNLT VTDPGTGLVY 240 TNLFDQMVDA VYFAMNRLGF PGVRIFIAET GWPNGGDLDQ IGANIFNAAT YNRNFIKKVT 300 RKPWLGTPAR PGSALPSFLF ALFNENQKPG PGTERHFGLL HPNGSRVYDV DLSGETPEAG 360 FRPLPVPENN EKFKGEIWCV AARPHNATAL AAALAYACSQ GNGTCDPIQP KGKCFKPDSV 420 FWHASYAFSA YWAQFRKVGG TCYFNGLATQ TAKDPSYGSC KFPSVTL* 480 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam07983 | X8 | 1.0e-11 | 378 | 449 | 81 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
| smart00768 | X8 | 1.0e-28 | 378 | 462 | 85 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
| pfam00332 | Glyco_hydro_17 | 2.0e-113 | 30 | 351 | 323 | + Glycosyl hydrolases family 17. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAM65039.1 | 0 | 21 | 467 | 17 | 460 | putative glucan endo-1-3-beta-glucosidase [Arabidopsis thaliana] |
| EMBL | CBI39470.1 | 0 | 9 | 467 | 11 | 467 | unnamed protein product [Vitis vinifera] |
| RefSeq | NP_683538.1 | 0 | 21 | 467 | 17 | 460 | glycosyl hydrolase family 17 protein [Arabidopsis thaliana] |
| RefSeq | XP_002303070.1 | 0 | 4 | 467 | 5 | 461 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002334812.1 | 0 | 1 | 467 | 1 | 465 | predicted protein [Populus trichocarpa] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 2cyg_A | 0 | 30 | 352 | 2 | 312 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
| PDB | 1ghs_B | 0 | 30 | 352 | 2 | 306 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
| PDB | 1ghs_A | 0 | 30 | 352 | 2 | 306 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
| PDB | 3f55_D | 0 | 30 | 353 | 3 | 316 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
| PDB | 3f55_C | 0 | 30 | 353 | 3 | 316 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
