| Basic Information | |
|---|---|
| Species | Glycine max |
| Cazyme ID | Glyma09g00620.2 |
| Family | CE8 |
| Protein Properties | Length: 253 Molecular Weight: 27945.5 Isoelectric Point: 8.2143 |
| Chromosome | Chromosome/Scaffold: 09 Start: 310941 End: 312660 |
| Description | Pectin lyase-like superfamily protein |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| CE8 | 1 | 237 | 0 |
| EQVVIPINKPCIFLQGAGRNSTSIEWGDHGNATFYTKANNTIAKGITFTDTSTTITQAKAARIHADKCVFFDCAFLGVQDTLYDDDGRHYYRNCYIQGGS DFIYGNGQSIFEASHIHFSMGKDGPERDGVITAHKRQTPNDTSGFVFKNCNITGAKGKTMLGRSLRPYARVIIAYSFLSNVVTPEGWSARTFVGHEGNIT FVEEGNRGPGANKSKRVKWMKHLSGLALDQFLNISYI | |||
| Full Sequence |
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| Protein Sequence Length: 253 Download |
| EQVVIPINKP CIFLQGAGRN STSIEWGDHG NATFYTKANN TIAKGITFTD TSTTITQAKA 60 ARIHADKCVF FDCAFLGVQD TLYDDDGRHY YRNCYIQGGS DFIYGNGQSI FEASHIHFSM 120 GKDGPERDGV ITAHKRQTPN DTSGFVFKNC NITGAKGKTM LGRSLRPYAR VIIAYSFLSN 180 VVTPEGWSAR TFVGHEGNIT FVEEGNRGPG ANKSKRVKWM KHLSGLALDQ FLNISYIDEE 240 GWIAELPPKI FI* 300 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02304 | PLN02304 | 1.0e-60 | 1 | 243 | 261 | + probable pectinesterase | ||
| PLN02682 | PLN02682 | 6.0e-62 | 1 | 243 | 263 | + pectinesterase family protein | ||
| PLN02432 | PLN02432 | 1.0e-64 | 1 | 243 | 247 | + putative pectinesterase | ||
| PLN02176 | PLN02176 | 1.0e-75 | 1 | 249 | 261 | + putative pectinesterase | ||
| PLN02497 | PLN02497 | 2.0e-88 | 1 | 247 | 259 | + probable pectinesterase | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005618 | cell wall |
| GO:0030599 | pectinesterase activity |
| GO:0042545 | cell wall modification |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| RefSeq | XP_002318946.1 | 0 | 1 | 247 | 78 | 338 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002330032.1 | 0 | 1 | 247 | 78 | 323 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002515255.1 | 0 | 1 | 247 | 81 | 335 | Pectinesterase-2 precursor, putative [Ricinus communis] |
| RefSeq | XP_002515259.1 | 0 | 1 | 247 | 403 | 660 | pectinesterase, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1xg2_A | 2e-26 | 1 | 219 | 44 | 277 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 1gq8_A | 8e-26 | 1 | 219 | 48 | 281 | A Chain A, Pectin Methylesterase From Carrot |
| PDB | 3uw0_A | 0.000000006 | 25 | 228 | 108 | 354 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |
| PDB | 2ntq_B | 0.0000003 | 5 | 111 | 48 | 185 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |
| PDB | 2ntq_A | 0.0000003 | 5 | 111 | 48 | 185 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| homogalacturonan degradation | RXN-2102 | EC-3.1.1.11 | pectinesterase |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| EX317112 | 260 | 1 | 245 | 0 |
| DV984237 | 260 | 1 | 245 | 0 |
| EX315894 | 260 | 1 | 245 | 0 |
| BE434583 | 184 | 68 | 251 | 0 |
| DR495026 | 247 | 14 | 245 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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