| Basic Information | |
|---|---|
| Species | Glycine max |
| Cazyme ID | Glyma09g04337.2 |
| Family | GH3 |
| Protein Properties | Length: 596 Molecular Weight: 64207.4 Isoelectric Point: 7.2447 |
| Chromosome | Chromosome/Scaffold: 09 Start: 3195076 End: 3201854 |
| Description | beta-xylosidase 1 |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH3 | 83 | 330 | 0 |
| AVPRLGIQGYEWWSEALHGVSNVGPGTKFGGAFPGATMFPQVISTAASFNQSLWQEIGRVVSDEARAMYNGGQAGLTYWSPNVNIFRDPRWGRGQETPGE DPTLAAKYAASYVKGLQGDGAGNRLKVAACCKHYTAYDLDNWNGVDRFHFNAKVSKQDLEDTYDVPFKACVLEGQVASVMCSYNQVNGKPTCADPDLLRN TIRGQWGLNGYIVSDCDSVGVFFDNQHYTRTPEEAAAEAIKAGLDLDC | |||
| Full Sequence |
|---|
| Protein Sequence Length: 596 Download |
| MACENDKKGH LLLALGLVLC VTLTFFPRVT EGRVPFACDP RNGLTRGFKF CNTHVPIHVR 60 VQDLIARLTL PEKIRLVVNN AIAVPRLGIQ GYEWWSEALH GVSNVGPGTK FGGAFPGATM 120 FPQVISTAAS FNQSLWQEIG RVVSDEARAM YNGGQAGLTY WSPNVNIFRD PRWGRGQETP 180 GEDPTLAAKY AASYVKGLQG DGAGNRLKVA ACCKHYTAYD LDNWNGVDRF HFNAKVSKQD 240 LEDTYDVPFK ACVLEGQVAS VMCSYNQVNG KPTCADPDLL RNTIRGQWGL NGYIVSDCDS 300 VGVFFDNQHY TRTPEEAAAE AIKAGLDLDC GPFLAIHTDS AIRKGLISEN DLNLALANLI 360 TVQMRLGMFD GEPSTQPFGN LGPRDVCTPA HQQLALEAAR ESIVLLQNKG NSLPLSPSRL 420 RIVGVIGPNT DATVTMIGNY AGVACGYTTP LQGIARYVKT AHQVGCRGVA CRGNELFGAA 480 EIIARQVDAT VLVMGLDQTI EAETRDRVGL LLPGLQQELV TRVARAAKGP VILVIMSGGP 540 VDVSFAKNNP KISAILWVGY PGQAGGTAIA DVIFGATNPG KLFSHHYLEF ISYTI* 600 |
| Functional Domains Download unfiltered results here | ||||||
|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description |
| pfam01915 | Glyco_hydro_3_C | 1.0e-49 | 403 | 582 | 187 | + Glycosyl hydrolase family 3 C-terminal domain. This domain is involved in catalysis and may be involved in binding beta-glucan. This domain is found associated with pfam00933. |
| COG1472 | BglX | 9.0e-60 | 79 | 466 | 394 | + Beta-glucosidase-related glycosidases [Carbohydrate transport and metabolism] |
| PRK15098 | PRK15098 | 2.0e-63 | 119 | 582 | 517 | + beta-D-glucoside glucohydrolase; Provisional |
| pfam00933 | Glyco_hydro_3 | 9.0e-66 | 71 | 362 | 296 | + Glycosyl hydrolase family 3 N terminal domain. |
| PLN03080 | PLN03080 | 0 | 48 | 580 | 543 | + Probable beta-xylosidase; Provisional |
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAS17751.2 | 0 | 12 | 582 | 9 | 579 | beta xylosidase [Fragaria x ananassa] |
| DDBJ | BAF79669.1 | 0 | 29 | 582 | 25 | 578 | beta-D-xylosidase [Pyrus pyrifolia] |
| DDBJ | BAG28345.1 | 0 | 25 | 580 | 17 | 571 | arabinofuranosidase [Citrus unshiu] |
| RefSeq | XP_002316021.1 | 0 | 28 | 594 | 20 | 589 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002519194.1 | 0 | 28 | 580 | 34 | 585 | Periplasmic beta-glucosidase precursor, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3u48_B | 0 | 119 | 582 | 91 | 565 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| PDB | 3u48_A | 0 | 119 | 582 | 91 | 565 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| PDB | 3u4a_B | 0 | 119 | 582 | 91 | 565 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| PDB | 3u4a_A | 0 | 119 | 582 | 91 | 565 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| PDB | 3ut0_D | 2e-37 | 80 | 574 | 99 | 565 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| (1,4)-β-xylan degradation | 3.2.1.37-RXN | EC-3.2.1.37 | xylan 1,4-β-xylosidase |
