| Basic Information | |
|---|---|
| Species | Glycine max |
| Cazyme ID | Glyma09g11676.2 |
| Family | CBM43 |
| Protein Properties | Length: 243 Molecular Weight: 24893.7 Isoelectric Point: 7.1975 |
| Chromosome | Chromosome/Scaffold: 09 Start: 11837842 End: 11840569 |
| Description | Carbohydrate-binding X8 domain superfamily protein |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| CBM43 | 57 | 137 | 3.3e-34 |
| WCIASQSAAENTLKVALDYACGYGADCSAIQPGASCYNPNTLKDHASYAFNDYYQKNPAPTSCAFGGTATLTNKDPSNGNC | |||
| Full Sequence |
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| Protein Sequence Length: 243 Download |
| MTPINPYTNP TTPKTSPTNP YSNPTTPTMA PPSPTTTTTT PTTPTTPTTT ASSGGQWCIA 60 SQSAAENTLK VALDYACGYG ADCSAIQPGA SCYNPNTLKD HASYAFNDYY QKNPAPTSCA 120 FGGTATLTNK DPSNGNCRYT SSKTPSMSPP TPTYVSPPNP PSTMTPTTPT TMTPSAPSTM 180 TPTTPGIMTP TAPGMTTIPG GASVYGTGPA GSPNTATSAS HSEVLLLTLF GLWASIRVEI 240 YI* 300 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam07983 | X8 | 4.0e-20 | 56 | 126 | 77 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
| smart00768 | X8 | 7.0e-36 | 56 | 139 | 85 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ABK94231.1 | 2.8026e-45 | 10 | 139 | 96 | 230 | unknown [Populus trichocarpa] |
| EMBL | CBI30817.1 | 8.40779e-45 | 53 | 213 | 31 | 164 | unnamed protein product [Vitis vinifera] |
| RefSeq | NP_001131448.1 | 4.00001e-40 | 57 | 200 | 109 | 252 | hypothetical protein LOC100192780 [Zea mays] |
| RefSeq | XP_002271903.1 | 1.96182e-44 | 53 | 213 | 126 | 259 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002519744.1 | 9.99967e-42 | 30 | 141 | 88 | 200 | hydrolase, hydrolyzing O-glycosyl compounds, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 2jon_A | 7e-19 | 46 | 139 | 2 | 96 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| EV282922 | 89 | 52 | 139 | 3.00018e-42 |
| FF541445 | 89 | 52 | 139 | 9.99967e-42 |
| EX293226 | 88 | 53 | 139 | 3.00004e-41 |
| EX270033 | 88 | 53 | 139 | 4.00001e-41 |
| GO531602 | 89 | 52 | 139 | 2e-40 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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