y
Basic Information | |
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Species | Glycine max |
Cazyme ID | Glyma09g29840.1 |
Family | GH14 |
Protein Properties | Length: 570 Molecular Weight: 62982.5 Isoelectric Point: 6.0417 |
Chromosome | Chromosome/Scaffold: 09 Start: 36715800 End: 36719768 |
Description | beta-amylase 1 |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH14 | 106 | 526 | 0 |
FVMMPLDSVTAGNAVNRKKAMNAAMAALKSAGVEGVMMDVWWGLVEREKPGEYNWGGYVELMEMAKKHGLKVQAVMSFHQCGGNVGDSCTIPLPKWVVEE IDNDHDLAYTDQWGRRNYEYISLGCDTLPVLKGRSPVQCYADFMRAFRDTFKHLLGDTIVEIQVGMGPAGELRYPSYPEQNGTWKFPGIGAFQCYDKYML SSLKAAAEAHGKPEWGSTGPTDAGHYNNWPEDTQFFRKEGGGWDGPYGEFFLTWYSQMLLEHGDRILSSATSIFDNTGVKISVKVAGIHWHYGTRSHAPE LTAGYYNTRFRDGYLPIAQMLARHGAIFNFTCIEMRDHEQPQEALCAPEKLVKQVALATQKAQVPLAGENALPRYDEYAHEQIIRASQLDVDGESGDREM CAFTYLRMNPHLFEPNNWRKF |
Full Sequence |
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Protein Sequence Length: 570 Download |
MALSMTQQIG TLAGATVPDS SAGESTAAVS AAAVWKSPTA SLKCKVMRTD GCAEGLSPPL 60 SPCRSPVLRA DLSAACQAFT AEVAEEEYVA GGKEEKGKGK EGVPVFVMMP LDSVTAGNAV 120 NRKKAMNAAM AALKSAGVEG VMMDVWWGLV EREKPGEYNW GGYVELMEMA KKHGLKVQAV 180 MSFHQCGGNV GDSCTIPLPK WVVEEIDNDH DLAYTDQWGR RNYEYISLGC DTLPVLKGRS 240 PVQCYADFMR AFRDTFKHLL GDTIVEIQVG MGPAGELRYP SYPEQNGTWK FPGIGAFQCY 300 DKYMLSSLKA AAEAHGKPEW GSTGPTDAGH YNNWPEDTQF FRKEGGGWDG PYGEFFLTWY 360 SQMLLEHGDR ILSSATSIFD NTGVKISVKV AGIHWHYGTR SHAPELTAGY YNTRFRDGYL 420 PIAQMLARHG AIFNFTCIEM RDHEQPQEAL CAPEKLVKQV ALATQKAQVP LAGENALPRY 480 DEYAHEQIIR ASQLDVDGES GDREMCAFTY LRMNPHLFEP NNWRKFVGFV KKMKEGKSAH 540 KCWEEVEREA EHFVHVTQPL VQEAAVLMH* 600 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02161 | PLN02161 | 3.0e-133 | 104 | 533 | 440 | + beta-amylase | ||
PLN02905 | PLN02905 | 2.0e-136 | 104 | 533 | 436 | + beta-amylase | ||
PLN02801 | PLN02801 | 6.0e-175 | 104 | 533 | 434 | + beta-amylase | ||
PLN00197 | PLN00197 | 0 | 1 | 569 | 579 | + beta-amylase; Provisional | ||
PLN02803 | PLN02803 | 0 | 104 | 536 | 433 | + beta-amylase |
Gene Ontology | |
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GO Term | Description |
GO:0000272 | polysaccharide catabolic process |
GO:0016161 | beta-amylase activity |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAY89374.1 | 0 | 1 | 569 | 1 | 576 | beta-amylase 1 [Nicotiana langsdorffii x Nicotiana sanderae] |
EMBL | CAN71375.1 | 0 | 3 | 569 | 1 | 570 | hypothetical protein [Vitis vinifera] |
RefSeq | XP_002285569.1 | 0 | 2 | 569 | 3 | 573 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002311706.1 | 0 | 3 | 566 | 1 | 558 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002518196.1 | 0 | 1 | 569 | 1 | 574 | Beta-amylase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1b1y_A | 0 | 103 | 533 | 6 | 435 | A Chain A, Sevenfold Mutant Of Barley Beta-Amylase |
PDB | 1wdp_A | 0 | 103 | 533 | 12 | 441 | A Chain A, Sevenfold Mutant Of Barley Beta-Amylase |
PDB | 1q6c_A | 0 | 103 | 533 | 12 | 441 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Complexed With Maltose |
PDB | 1bfn_A | 0 | 103 | 533 | 12 | 441 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Complexed With Maltose |
PDB | 1ukp_D | 0 | 103 | 533 | 12 | 441 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Mutant Substituted At Surface Region |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
starch degradation I | RXN-1827 | EC-3.2.1.2 | β-amylase |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
HO779314 | 410 | 161 | 570 | 0 |
HO798206 | 348 | 223 | 570 | 0 |
HO826564 | 409 | 159 | 567 | 0 |
DT555349 | 320 | 190 | 509 | 0 |
DY279190 | 349 | 222 | 569 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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