| Basic Information | |
|---|---|
| Species | Glycine max |
| Cazyme ID | Glyma09g35210.2 |
| Family | AA3 |
| Protein Properties | Length: 808 Molecular Weight: 88642.8 Isoelectric Point: 8.252 |
| Chromosome | Chromosome/Scaffold: 09 Start: 41407019 End: 41415574 |
| Description | Long-chain fatty alcohol dehydrogenase family protein |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| AA3 | 286 | 799 | 0 |
| NLSCPSLVIQCDAVVVGSGSGGGVIAGVLAKAGYKVLVLEKGGYSAKNNLSLLEGPTMDQMYLNGGLVASDDMGVFILSGSTVGGGSAINWSACIKTPQH VCKEWCDKHGLELFESELYREALDAVCGKMGVQSEIEDEGFNNAILRKGCQEMGYPVNNIPRNSPSNHYCGWCCMGCKDGRKKGTSETWLVDLVKSGNGA ILPGCEAIKVLHKKKEGKDRKIARGVAFEFEYKGTKDVCVVESKVTIVACGALSTPALLKRSGLRNQNIGKNLHLHPVVMAWGYFPDAPESEVWPEAYKK SYEGGIMTAMSTVVAEFEQSGYGAVIQTPSLHPGMFSIVTPWTSGIDIRDRMRKFSRTAHIFALARDQGSGTVKAPDRISYKPADVDEENLKKGIEKVLR ILAAAGAEEIGTHHNKGRTLNVKQVSYHEFEKFVKEESSRSLTDLTTPLCSAHQMGSCRMGSNPKQSVVNPTGETWEVEGLYVADASVFPTALGVNPMVT VQAIAYCTAQSVVE | |||
| Full Sequence |
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| Protein Sequence Length: 808 Download |
| MEDRSIGRKG SFRLGLGMDG KKDHSVVELG SIDTQRLLLS NGEREKKLQP LTNSLSPRQM 60 KSLTALCDTI LPSVADHFVD SSDESVTKFY QISASMTGTP ERFGGMISER LKHPLTGLLK 120 FVLWLLSTWY GTLIFCGIGC LSTQFPFIHA YPHLSLQKRQ KIMRSWSLSY LRHFRMLFRT 180 IKLLTLLIFF TQIDESEDNV AWKAIGYCGP DPEFKAQLKN HFLDGTSKGG GQEDKEEDED 240 AEEMIGPLYK GLVHLNYPQD ITADALRRFG FPVSVIRRKH KAAAANLSCP SLVIQCDAVV 300 VGSGSGGGVI AGVLAKAGYK VLVLEKGGYS AKNNLSLLEG PTMDQMYLNG GLVASDDMGV 360 FILSGSTVGG GSAINWSACI KTPQHVCKEW CDKHGLELFE SELYREALDA VCGKMGVQSE 420 IEDEGFNNAI LRKGCQEMGY PVNNIPRNSP SNHYCGWCCM GCKDGRKKGT SETWLVDLVK 480 SGNGAILPGC EAIKVLHKKK EGKDRKIARG VAFEFEYKGT KDVCVVESKV TIVACGALST 540 PALLKRSGLR NQNIGKNLHL HPVVMAWGYF PDAPESEVWP EAYKKSYEGG IMTAMSTVVA 600 EFEQSGYGAV IQTPSLHPGM FSIVTPWTSG IDIRDRMRKF SRTAHIFALA RDQGSGTVKA 660 PDRISYKPAD VDEENLKKGI EKVLRILAAA GAEEIGTHHN KGRTLNVKQV SYHEFEKFVK 720 EESSRSLTDL TTPLCSAHQM GSCRMGSNPK QSVVNPTGET WEVEGLYVAD ASVFPTALGV 780 NPMVTVQAIA YCTAQSVVEV LKRKRSK* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PRK02106 | PRK02106 | 8.0e-8 | 738 | 776 | 39 | + choline dehydrogenase; Validated | ||
| pfam05199 | GMC_oxred_C | 2.0e-26 | 663 | 791 | 129 | + GMC oxidoreductase. This domain found associated with pfam00732. | ||
| COG2303 | BetA | 5.0e-39 | 314 | 791 | 540 | + Choline dehydrogenase and related flavoproteins [Amino acid transport and metabolism] | ||
| pfam00732 | GMC_oxred_N | 1.0e-72 | 343 | 563 | 224 | + GMC oxidoreductase. This family of proteins bind FAD as a cofactor. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0016614 | oxidoreductase activity, acting on CH-OH group of donors |
| GO:0050660 | flavin adenine dinucleotide binding |
| GO:0055114 | oxidation-reduction process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CBI29206.1 | 0 | 21 | 801 | 5 | 644 | unnamed protein product [Vitis vinifera] |
| RefSeq | NP_193673.2 | 0 | 60 | 805 | 1 | 726 | alcohol oxidase-related [Arabidopsis thaliana] |
| RefSeq | XP_002269629.1 | 0 | 21 | 807 | 5 | 789 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002328753.1 | 0 | 60 | 806 | 1 | 746 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002519938.1 | 0 | 102 | 806 | 7 | 710 | electron carrier, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3t37_A | 0.000006 | 295 | 795 | 17 | 518 | A Chain A, Crystal Structure Of Pyridoxine 4-Oxidase From Mesorbium Loti |
| PDB | 3ljp_B | 0.0003 | 464 | 789 | 204 | 518 | A Chain A, Crystal Structure Of Choline Oxidase V464a Mutant |
| PDB | 3ljp_A | 0.0003 | 464 | 789 | 204 | 518 | A Chain A, Crystal Structure Of Choline Oxidase V464a Mutant |
| PDB | 2jbv_B | 0.0006 | 464 | 789 | 204 | 518 | A Chain A, Crystal Structure Of Choline Oxidase Reveals Insights Into The Catalytic Mechanism |
| PDB | 2jbv_A | 0.0006 | 464 | 789 | 204 | 518 | A Chain A, Crystal Structure Of Choline Oxidase Reveals Insights Into The Catalytic Mechanism |
