| Basic Information | |
|---|---|
| Species | Glycine max |
| Cazyme ID | Glyma10g01355.1 |
| Family | CE8 |
| Protein Properties | Length: 268 Molecular Weight: 29808.9 Isoelectric Point: 9.6899 |
| Chromosome | Chromosome/Scaffold: 10 Start: 994937 End: 998265 |
| Description | Pectin lyase-like superfamily protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| CE8 | 60 | 138 | 1.1e-23 |
| VSQDGTGDFKTITEALNSIPPRNTRRVIVSIAPGVYREKVMIPKTLPFITLLGDAGDPPTITGNDTASVSGRTFQSATV | |||
| CE8 | 136 | 260 | 1.5e-39 |
| ATVQNCYLNSTTRKVASITAQKRTNSSLESGFSFKNCTVIGSGQVYLGRAWGDYSRVVFSYTFMDNIVLAKGWSDWGDQKRDSRVYYGEYKCSGPGANLA GRVPWTRVLTDEEAKPFIEMQFIEG | |||
| Full Sequence |
|---|
| Protein Sequence Length: 268 Download |
| MVAKSHFQVI ILFLLSLLYI TSSYTHTQAD FDKWVSRNVK NYQKRNILEA KLKVAAPDRV 60 SQDGTGDFKT ITEALNSIPP RNTRRVIVSI APGVYREKVM IPKTLPFITL LGDAGDPPTI 120 TGNDTASVSG RTFQSATVQN CYLNSTTRKV ASITAQKRTN SSLESGFSFK NCTVIGSGQV 180 YLGRAWGDYS RVVFSYTFMD NIVLAKGWSD WGDQKRDSRV YYGEYKCSGP GANLAGRVPW 240 TRVLTDEEAK PFIEMQFIEG DTWLISP* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
 | ||||||||
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02432 | PLN02432 | 2.0e-16 | 59 | 138 | 80 | + putative pectinesterase | ||
| PLN02682 | PLN02682 | 1.0e-19 | 30 | 138 | 117 | + pectinesterase family protein | ||
| PLN02665 | PLN02665 | 1.0e-47 | 142 | 267 | 132 | + pectinesterase family protein | ||
| PLN02432 | PLN02432 | 8.0e-48 | 135 | 264 | 130 | + putative pectinesterase | ||
| PLN02682 | PLN02682 | 1.0e-62 | 139 | 264 | 126 | + pectinesterase family protein | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005618 | cell wall |
| GO:0030599 | pectinesterase activity |
| GO:0042545 | cell wall modification |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CAN79461.1 | 0 | 139 | 267 | 253 | 381 | hypothetical protein [Vitis vinifera] |
| RefSeq | NP_179755.1 | 0 | 59 | 264 | 52 | 332 | pectinesterase family protein [Arabidopsis thaliana] |
| RefSeq | XP_002310842.1 | 0.000000004 | 30 | 137 | 12 | 126 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002310842.1 | 0 | 139 | 266 | 211 | 338 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002320279.1 | 0 | 129 | 264 | 156 | 287 | predicted protein [Populus trichocarpa] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1xg2_A | 4e-17 | 153 | 266 | 181 | 306 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 1xg2_A | 0.00000009 | 60 | 138 | 7 | 85 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 1gq8_A | 0.0000000000005 | 153 | 264 | 185 | 308 | A Chain A, Pectin Methylesterase From Carrot |
| PDB | 1gq8_A | 0.0000000005 | 60 | 138 | 11 | 89 | A Chain A, Pectin Methylesterase From Carrot |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| homogalacturonan degradation | RXN-2102 | EC-3.1.1.11 | pectinesterase |
