Basic Information | |
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Species | Glycine max |
Cazyme ID | Glyma10g21710.1 |
Family | GT47 |
Protein Properties | Length: 488 Molecular Weight: 56349.7 Isoelectric Point: 6.4339 |
Chromosome | Chromosome/Scaffold: 10 Start: 27570829 End: 27575493 |
Description | exostosin family protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT47 | 41 | 394 | 0 |
KKRPLVYVYDLPPEFNSLLLEGRHYKLECVNRIYDDNNITVWTDQLYGAQIALYESLLASPHRTLNGEEADFFFVPVLDSCIITRADDAPHLSMQEHMGL RSSLTLEYYKNTYTHIVEQYPYWSHSSGRDHIWSFSWDEGACYAPKEIWNSMMLVHWGNTNTKHNHSTTAYWADNWDKISSDRRGIHPCFDPDKDLVLPA WKVPDAYVLTSKLWARSHEKRKTLFYFNGNLGPAYPHGRPEDTYSMGIRQKLAEEFGSSPNKDGKLGKQHAKDVIVTPERSEDYHMDLASSVFCGVFPGD GWSGRMEDSILQGCIPVVIQDGIFLPYENVLNYDSFAVRIPEAEIPNLIKTLRG |
Full Sequence |
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Protein Sequence Length: 488 Download |
MPSVISSIKE WPSWLRPARI HIADDTHANE KMINLNAVVA KKRPLVYVYD LPPEFNSLLL 60 EGRHYKLECV NRIYDDNNIT VWTDQLYGAQ IALYESLLAS PHRTLNGEEA DFFFVPVLDS 120 CIITRADDAP HLSMQEHMGL RSSLTLEYYK NTYTHIVEQY PYWSHSSGRD HIWSFSWDEG 180 ACYAPKEIWN SMMLVHWGNT NTKHNHSTTA YWADNWDKIS SDRRGIHPCF DPDKDLVLPA 240 WKVPDAYVLT SKLWARSHEK RKTLFYFNGN LGPAYPHGRP EDTYSMGIRQ KLAEEFGSSP 300 NKDGKLGKQH AKDVIVTPER SEDYHMDLAS SVFCGVFPGD GWSGRMEDSI LQGCIPVVIQ 360 DGIFLPYENV LNYDSFAVRI PEAEIPNLIK TLRGFNDTEI EFKLANVQKI WQRFLYRDSV 420 LLEAERQKTA IGHVDDWAVE FLKLTEDDAF ATLIQILHYK LHNDRWRKQV RHNKQFGLPH 480 QCLVSTS* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam03016 | Exostosin | 4.0e-64 | 40 | 395 | 357 | + Exostosin family. The EXT family is a family of tumour suppressor genes. Mutations of EXT1 on 8q24.1, EXT2 on 11p11-13, and EXT3 on 19p have been associated with the autosomal dominant disorder known as hereditary multiple exostoses (HME). This is the most common known skeletal dysplasia. The chromosomal locations of other EXT genes suggest association with other forms of neoplasia. EXT1 and EXT2 have both been shown to encode a heparan sulphate polymerase with both D-glucuronyl (GlcA) and N-acetyl-D-glucosaminoglycan (GlcNAC) transferase activities. The nature of the defect in heparan sulphate biosynthesis in HME is unclear. |
Gene Ontology | |
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GO Term | Description |
GO:0016020 | membrane |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CAN80640.1 | 0 | 1 | 477 | 323 | 809 | hypothetical protein [Vitis vinifera] |
EMBL | CBI29877.1 | 0 | 1 | 486 | 335 | 821 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002277596.1 | 0 | 1 | 486 | 307 | 793 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002308967.1 | 0 | 1 | 487 | 306 | 793 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002526728.1 | 0 | 1 | 483 | 256 | 725 | catalytic, putative [Ricinus communis] |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
HO782792 | 311 | 183 | 488 | 0 |
GO884759 | 305 | 33 | 334 | 0 |
EH756685 | 261 | 96 | 356 | 0 |
EY104701 | 255 | 128 | 382 | 0 |
DV125386 | 242 | 141 | 382 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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