| Basic Information | |
|---|---|
| Species | Glycine max |
| Cazyme ID | Glyma10g28475.1 |
| Family | CBM43 |
| Protein Properties | Length: 612 Molecular Weight: 64526.5 Isoelectric Point: 8.4734 |
| Chromosome | Chromosome/Scaffold: 10 Start: 37362751 End: 37366366 |
| Description | Carbohydrate-binding X8 domain superfamily protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| CBM43 | 409 | 490 | 2.2e-34 |
| WCVAKQGAPEASLQSALDYACGMGGADCSQIQQGGNCYSPVTLQNHASVAFNSYYQKNPAPTSCDFGGTATLVNTNPSTGSC | |||
| Full Sequence |
|---|
| Protein Sequence Length: 612 Download |
| MAKEASLCLL FLFSFLSTSC SGSLVGFSYR ERGDTSTSAR TISFLQQSNV SPTQIRIFVT 60 DHRILSTLSN SKVLTDVYLN KSQVENFIIS KPSELKAHLL NILSHSNIKS IIASCGSECL 120 AQNEMPLFLH ALKSIGSVLR ELHLGREVKI SVAYPLSFLE KLNASHENSI RRILSFIKET 180 KSFVMVEDSI GGELSMGDHF VHAIIKRATL AASILPCKDV PIVLTIKSTV ILPSMELAQF 240 SEKISKYLES ETHIRKRIAA LYIEVHSAKD FASKKLKRRS LDDTTNPTNT VFPTNPASST 300 PIITPPDTPT IITVPATNPV TISPSNPAAM PVTVPSTTPV PNPITPTNPA NSPVPVSNPA 360 TTPIATPPPV TNPVTSYPPP SGNVPPVVNP QPQPPPANTN APAIQGQSWC VAKQGAPEAS 420 LQSALDYACG MGGADCSQIQ QGGNCYSPVT LQNHASVAFN SYYQKNPAPT SCDFGGTATL 480 VNTNPSTGSC IFPSSSSSSS TTTMPKSSPP TPPTQSSPIA LPPPSPLTPE PSIPTAPPTS 540 SSSGTGPFGY GAPPSELNSS NPASGIMPGF ASDSPPVVNT TSVSRSVGLR PFVGFTILMV 600 SFGTTRLSMH P* 660 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam07983 | X8 | 5.0e-24 | 408 | 479 | 78 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
| smart00768 | X8 | 1.0e-35 | 408 | 484 | 78 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ACN28414.1 | 0 | 1 | 497 | 10 | 512 | unknown [Zea mays] |
| EMBL | CAN65737.1 | 0 | 126 | 610 | 38 | 518 | hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002276666.1 | 0 | 1 | 609 | 1 | 613 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002319461.1 | 0 | 1 | 602 | 1 | 606 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002512573.1 | 0 | 196 | 602 | 1 | 397 | hydrolase, hydrolyzing O-glycosyl compounds, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 2jon_A | 3e-17 | 408 | 497 | 12 | 101 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |
