Basic Information | |
---|---|
Species | Glycine max |
Cazyme ID | Glyma10g28753.1 |
Family | CE8 |
Protein Properties | Length: 331 Molecular Weight: 36632.4 Isoelectric Point: 7.897 |
Chromosome | Chromosome/Scaffold: 10 Start: 37619170 End: 37620885 |
Description | Pectin lyase-like superfamily protein |
View CDS |
External Links |
---|
NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
---|---|---|---|
Family | Start | End | Evalue |
CE8 | 37 | 319 | 0 |
IVVDQSGKSDFHTIQAAIDSIKTSNNKWVKIHIKAGTYTEQIQIPYNMPCIFLEGQGKEVTTVTYNDHQKTDISATFSSFPDNVVASGITFKNSFDTAAI LSYDGKRIPALAARIYGDKSAFYNCSFIGFQDTLWDVEGRHYYKNCLIEGAVDFIWGSGQSYFVDCVLNVTSSGSITAQGRSSNSDPSGFVFQRGSVVGS GSAILGRAYDRCSRVIFYDTNLGSVVDPQGWNAWHYTKHEDCIYYAEVGCTGVGANTSKRVPWRKKLTISEFRQQFSTSVFID |
Full Sequence |
---|
Protein Sequence Length: 331 Download |
MKLLPREIIF SLILFIICSS KVCKAMDCGG TQVSRTIVVD QSGKSDFHTI QAAIDSIKTS 60 NNKWVKIHIK AGTYTEQIQI PYNMPCIFLE GQGKEVTTVT YNDHQKTDIS ATFSSFPDNV 120 VASGITFKNS FDTAAILSYD GKRIPALAAR IYGDKSAFYN CSFIGFQDTL WDVEGRHYYK 180 NCLIEGAVDF IWGSGQSYFV DCVLNVTSSG SITAQGRSSN SDPSGFVFQR GSVVGSGSAI 240 LGRAYDRCSR VIFYDTNLGS VVDPQGWNAW HYTKHEDCIY YAEVGCTGVG ANTSKRVPWR 300 KKLTISEFRQ QFSTSVFIDH EGWLSKIPLN * |
Functional Domains Download unfiltered results here | ||||||||
---|---|---|---|---|---|---|---|---|
Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02665 | PLN02665 | 3.0e-78 | 35 | 324 | 299 | + pectinesterase family protein | ||
PLN02432 | PLN02432 | 3.0e-81 | 37 | 324 | 290 | + putative pectinesterase | ||
PLN02480 | PLN02480 | 2.0e-83 | 35 | 324 | 297 | + Probable pectinesterase | ||
PLN02176 | PLN02176 | 1.0e-107 | 27 | 329 | 311 | + putative pectinesterase | ||
PLN02497 | PLN02497 | 8.0e-116 | 34 | 329 | 303 | + probable pectinesterase |
Gene Ontology | |
---|---|
GO Term | Description |
GO:0005618 | cell wall |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - NR Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
RefSeq | XP_002318946.1 | 0 | 12 | 329 | 11 | 339 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002323773.1 | 0 | 37 | 329 | 1 | 289 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002330032.1 | 0 | 9 | 329 | 7 | 324 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002518106.1 | 0 | 36 | 329 | 47 | 336 | Pectinesterase U1 precursor, putative [Ricinus communis] |
RefSeq | XP_002529267.1 | 0 | 33 | 328 | 36 | 337 | Pectinesterase-2 precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1gq8_A | 9.99995e-41 | 33 | 324 | 5 | 308 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 1xg2_A | 2e-30 | 38 | 324 | 6 | 304 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 3uw0_A | 0.00000000001 | 1 | 227 | 6 | 232 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |
PDB | 2ntq_B | 0.00000000002 | 47 | 204 | 18 | 190 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |
PDB | 2ntq_A | 0.00000000002 | 47 | 204 | 18 | 190 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |
Metabolic Pathways | |||
---|---|---|---|
Pathway Name | Reaction | EC | Protein Name |
homogalacturonan degradation | RXN-2102 | EC-3.1.1.11 | pectinesterase |