| Basic Information | |
|---|---|
| Species | Glycine max |
| Cazyme ID | Glyma10g31540.4 |
| Family | GT5 |
| Protein Properties | Length: 609 Molecular Weight: 66914.8 Isoelectric Point: 7.9052 |
| Chromosome | Chromosome/Scaffold: 10 Start: 40021619 End: 40026683 |
| Description | UDP-Glycosyltransferase superfamily protein |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GT5 | 85 | 580 | 0 |
| IFVGTEVAPWSKTGGLGDVLGGLPPALAGNGHRVMTVSPRYDQYKDAWDTSVTVEVKIGDRIETVRFFHCYKRGVDRIFVDHPCFLEKVWGKTRSKLYGP SAGVDYEDNQLRFSLLCQAALEAPRVLNLNSNKYFSGPYGDDVIFIANDWHTALLPCYLKSMYQTRGIYKNAKVAFCLHNIAYQGRHAFADFSLLNLPRE FKGSFDFTDGHVKPVKGRKLNWMKAAILESDRVLTVSPYYAQELVSGEERGVELNNIIRSCGITGIVNGMDNREWSPKTDKFIDLHYDATTVTEAKLLLK EALQAEVGLPVDRNIPLIGFIGRLEEQKGSDILVEAIPMFIDQNVQIMILGTGKKVMEKQIEQLEEIYPDKVRGVAKFNGPLAHKIIAGADFIVIPSRFE PCGLVQLHAMPYGTVPIVSSTGGLVDTVQEGYTGFHMGAFNVECEAVDPVDVEKLATTVKRALGTYGTPAMTQMIQNCMAQDFSWKGPAKQWEKVL | |||
| Full Sequence |
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| Protein Sequence Length: 609 Download |
| MATVTASSYA VSGSACHSHR GASRREAKVN SLAQVSLNYD GLRSLNKLHV RTTRAAKTKT 60 LLSAKSNKSG HDGVLGRIKC GMNMIFVGTE VAPWSKTGGL GDVLGGLPPA LAGNGHRVMT 120 VSPRYDQYKD AWDTSVTVEV KIGDRIETVR FFHCYKRGVD RIFVDHPCFL EKVWGKTRSK 180 LYGPSAGVDY EDNQLRFSLL CQAALEAPRV LNLNSNKYFS GPYGDDVIFI ANDWHTALLP 240 CYLKSMYQTR GIYKNAKVAF CLHNIAYQGR HAFADFSLLN LPREFKGSFD FTDGHVKPVK 300 GRKLNWMKAA ILESDRVLTV SPYYAQELVS GEERGVELNN IIRSCGITGI VNGMDNREWS 360 PKTDKFIDLH YDATTVTEAK LLLKEALQAE VGLPVDRNIP LIGFIGRLEE QKGSDILVEA 420 IPMFIDQNVQ IMILGTGKKV MEKQIEQLEE IYPDKVRGVA KFNGPLAHKI IAGADFIVIP 480 SRFEPCGLVQ LHAMPYGTVP IVSSTGGLVD TVQEGYTGFH MGAFNVECEA VDPVDVEKLA 540 TTVKRALGTY GTPAMTQMIQ NCMAQDFSWK GPAKQWEKVL LSLEVAGSEP GIDGDEIAPL 600 AKENVANP* 660 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PRK14099 | PRK14099 | 5.0e-74 | 182 | 583 | 407 | + glycogen synthase; Provisional | ||
| COG0297 | GlgA | 1.0e-105 | 82 | 578 | 518 | + Glycogen synthase [Carbohydrate transport and metabolism] | ||
| PRK00654 | glgA | 3.0e-123 | 82 | 579 | 507 | + glycogen synthase; Provisional | ||
| TIGR02095 | glgA | 1.0e-162 | 82 | 583 | 510 | + glycogen/starch synthase, ADP-glucose type. This family consists of glycogen (or starch) synthases that use ADP-glucose (EC 2.4.1.21), rather than UDP-glucose (EC 2.4.1.11) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate [Energy metabolism, Biosynthesis and degradation of polysaccharides]. | ||
| cd03791 | GT1_Glycogen_synthase_DULL1_like | 2.0e-165 | 83 | 580 | 511 | + This family is most closely related to the GT1 family of glycosyltransferases. Glycogen synthase catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0009058 | biosynthetic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAC70779.1 | 0 | 1 | 608 | 1 | 607 | granule-bound glycogen (starch) synthase [Astragalus membranaceus] |
| GenBank | ABP35817.1 | 0 | 1 | 608 | 1 | 603 | granule-bound starch synthase Ia precursor [Vigna unguiculata] |
| GenBank | ACB30382.1 | 0 | 1 | 608 | 1 | 606 | granule bound starch synthase Ia precursor [Vigna radiata] |
| GenBank | ACB30384.1 | 0 | 1 | 608 | 1 | 610 | granule bound starch synthase Ia precursor [Lotus japonicus] |
| GenBank | ACB97679.1 | 0 | 1 | 608 | 1 | 608 | granule bound starch synthase Ia precursor [Glycine max] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3vuf_A | 0 | 82 | 608 | 10 | 536 | A Chain A, Crystal Structure Of E.Coli Gs Mutant Dmgs(C7s;c40 |
| PDB | 3vue_A | 0 | 82 | 608 | 10 | 536 | A Chain A, Crystal Structure Of Rice Granule Bound Starch Synthase I Catalytic Domain |
| PDB | 3d1j_A | 0 | 82 | 584 | 1 | 477 | A Chain A, Crystal Structure Of E.Coli Gs Mutant Dmgs(C7s;c40 |
| PDB | 3guh_A | 0 | 82 | 585 | 1 | 478 | A Chain A, Crystal Structure Of E.Coli Gs Mutant Dmgs(C7s;c40 |
| PDB | 2r4u_A | 0 | 82 | 585 | 1 | 478 | A Chain A, Crystal Structure Of E.Coli Gs Mutant Dmgs(C7s;c40 |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| starch biosynthesis | GLYCOGENSYN-RXN | EC-2.4.1.21 | starch synthase |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| AJ568414 | 619 | 1 | 609 | 0 |
| HO825853 | 517 | 90 | 606 | 0 |
| HO629148 | 585 | 30 | 609 | 0 |
| CN831271 | 382 | 228 | 609 | 0 |
| HO778340 | 376 | 76 | 449 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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