| Basic Information | |
|---|---|
| Species | Glycine max |
| Cazyme ID | Glyma10g32320.1 |
| Family | GH47 |
| Protein Properties | Length: 620 Molecular Weight: 69648.3 Isoelectric Point: 4.8664 |
| Chromosome | Chromosome/Scaffold: 10 Start: 40787386 End: 40796136 |
| Description | Glycosyl hydrolase family 47 protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH47 | 44 | 469 | 0 |
| MFYHAFNGYMDHAFPLDELRPLSCAGHDTLGGYALTLIDSLDTLALLGDRQRFSASVEWIGKNLRFDINKTVSLFETTIRVLGGLLSAHLIATDYATGMR VPLYDNQLLNLAEDLARRLLPAFDTPTGIPFGSVNLLHGVDKHESKITSTAGGGTLTLEFGVLSRLTNDPIFEQVTKNAVRGLWARRSKLNLVGAHINVF TGEWTQKDAGIGTSIDSFYEYLLKAYLLFGDEEYLYIFQEAYAAAMHYLYHDPWYVEVNMDSAAIVWPLFNSLQAFWPGLQVLAGDINPAIRTHAAFLSV WRRYGFTPEGFNLASLSVQHGQKSYPLRPELIESTYWLYKATRDPRYLDAGRDMVASLQYGTRCPCGYCHISDVENHQQEDHMESFFLAETVKYLWLLFD LAVGPDNLVENGPYKYIFSTEGHLLP | |||
| Full Sequence |
|---|
| Protein Sequence Length: 620 Download |
| MEGIIQIRSV LLLLSITMAS LTLAVADGVS REEAKELRDE VKDMFYHAFN GYMDHAFPLD 60 ELRPLSCAGH DTLGGYALTL IDSLDTLALL GDRQRFSASV EWIGKNLRFD INKTVSLFET 120 TIRVLGGLLS AHLIATDYAT GMRVPLYDNQ LLNLAEDLAR RLLPAFDTPT GIPFGSVNLL 180 HGVDKHESKI TSTAGGGTLT LEFGVLSRLT NDPIFEQVTK NAVRGLWARR SKLNLVGAHI 240 NVFTGEWTQK DAGIGTSIDS FYEYLLKAYL LFGDEEYLYI FQEAYAAAMH YLYHDPWYVE 300 VNMDSAAIVW PLFNSLQAFW PGLQVLAGDI NPAIRTHAAF LSVWRRYGFT PEGFNLASLS 360 VQHGQKSYPL RPELIESTYW LYKATRDPRY LDAGRDMVAS LQYGTRCPCG YCHISDVENH 420 QQEDHMESFF LAETVKYLWL LFDLAVGPDN LVENGPYKYI FSTEGHLLPA TPQISLVREH 480 CLYYGAYCRS GDLRQTYFVP ESDKDKKESN DTGFYESWTK PTYSSDYTTV EPSAVSGLIK 540 GFCPGLNHGQ KFGILYAYPT DERHDYETNQ VQQKESTTAV QLQSHSVLVL RDQSSDNLLP 600 EDNSSNHNDS QTNESSDTP* 660 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PTZ00470 | PTZ00470 | 1.0e-79 | 32 | 473 | 479 | + glycoside hydrolase family 47 protein; Provisional | ||
| pfam01532 | Glyco_hydro_47 | 2.0e-171 | 44 | 469 | 461 | + Glycosyl hydrolase family 47. Members of this family are alpha-mannosidases that catalyze the hydrolysis of the terminal 1,2-linked alpha-D-mannose residues in the oligo-mannose oligosaccharide Man(9)(GlcNAc)(2). | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004571 | mannosyl-oligosaccharide 1,2-alpha-mannosidase activity |
| GO:0005509 | calcium ion binding |
| GO:0016020 | membrane |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CBI26354.1 | 0 | 27 | 599 | 28 | 633 | unnamed protein product [Vitis vinifera] |
| RefSeq | NP_199184.1 | 0 | 12 | 598 | 12 | 586 | glycoside hydrolase family 47 protein [Arabidopsis thaliana] |
| RefSeq | XP_002280131.1 | 0 | 27 | 609 | 28 | 629 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002311656.1 | 0 | 26 | 596 | 1 | 565 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002517026.1 | 0 | 10 | 618 | 13 | 614 | Mannosyl-oligosaccharide 1,2-alpha-mannosidase IA, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1fo3_A | 0 | 41 | 469 | 14 | 455 | A Chain A, The Structure Of Alpha-N-Acetylgalactosaminidase |
| PDB | 1fo2_A | 0 | 41 | 469 | 14 | 455 | A Chain A, Crystal Structure Of Human Class I Alpha1,2-Mannosidase In Complex With 1-Deoxymannojirimycin |
| PDB | 1fmi_A | 0 | 41 | 469 | 14 | 455 | A Chain A, Crystal Structure Of Human Class I Alpha1,2-Mannosidase |
| PDB | 1x9d_A | 0 | 41 | 469 | 92 | 533 | A Chain A, Crystal Structure Of Human Class I Alpha-1,2-Mannosidase In Complex With Thio-Disaccharide Substrate Analogue |
| PDB | 1nxc_A | 0 | 35 | 469 | 18 | 464 | A Chain A, Structure Of Mouse Golgi Alpha-1,2-Mannosidase Ia Reveals The Molecular Basis For Substrate Specificity Among Class I Enzymes (Family 47 Glycosidases) |
