| Basic Information | |
|---|---|
| Species | Glycine max |
| Cazyme ID | Glyma10g34440.2 |
| Family | GT64 |
| Protein Properties | Length: 769 Molecular Weight: 86432.4 Isoelectric Point: 9.0419 |
| Chromosome | Chromosome/Scaffold: 10 Start: 42576158 End: 42581401 |
| Description | glycosyltransferase family protein 47 |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GT64 | 521 | 753 | 0 |
| FTLLTMTYDARLWNLKMYVKHYSRCSSVREIVVVWNKGVPPKLSDLDSAVPVRIREEKKNSLNNRFNADPLIKTRAVLELDDDIMMPCDDVERGFNVWRQ HPDRIVGFYPRLIDGSPLKYRGEKYARSHKGYNMILTGAAFIDSQVAFKRYGSKEAEKGRELVDKIFNCEDVLLNYLYANASSSSRTVDYVKPAWAIDTS KFSGAAISRNTKVHYQLRSHCLMKFSEMYGSLA | |||
| Full Sequence |
|---|
| Protein Sequence Length: 769 Download |
| MGSGQIGGGG NGGGCSNGGS CCDMSVKCSC RWRLENQQYY KRLFSSGFIF FFGCFVLFGS 60 IATLYGWFAF SPTVHTALSS SFGCREDNEG SWSIGVFYGD SPFSLKPIEA ANVSNDETAA 120 WPVANPVVTC ASVSDVGYPS NFVADPFLFI QGNTFYLFYE TKNSITMQGD IGVSKSTDKG 180 ATWQQLGIAL NEDWHLSYPY VFEHDGQIYM MPEGSQKGDL RLYRAVNFPL QWRLEKVVMK 240 KPLVDSFVIN HGGRYWLFGS DHSGFGTQKN GQLEIWYSNS PLGPWNPHKK NPIYNIDRSL 300 GARNGGRPFK YEGNLYRMGQ DCGDTYGRKL RVFKIETLTI DEYKEVEVPL GFVESNKGRN 360 AWNGARYHHL DVQHLPSGGW VGVMDGDHVP SGDSVRRFTV GCASVAVAAI LIVLLGVLLG 420 FVNCIVPLNW FIHNSGKRNF TVLSWERSNV FCSRVRRFCS RLNRAPTFLR GKIKHNACAR 480 RFILAIIFAV GVGLMCIGVK NIYGGNGSEE PYPLKGQYSQ FTLLTMTYDA RLWNLKMYVK 540 HYSRCSSVRE IVVVWNKGVP PKLSDLDSAV PVRIREEKKN SLNNRFNADP LIKTRAVLEL 600 DDDIMMPCDD VERGFNVWRQ HPDRIVGFYP RLIDGSPLKY RGEKYARSHK GYNMILTGAA 660 FIDSQVAFKR YGSKEAEKGR ELVDKIFNCE DVLLNYLYAN ASSSSRTVDY VKPAWAIDTS 720 KFSGAAISRN TKVHYQLRSH CLMKFSEMYG SLAGRKWGFD SRNDGWDV* 780 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| cd08978 | GH_F | 0.003 | 121 | 294 | 189 | + Glycosyl hydrolase families 43 and 62 form CAZY clan GH-F. This glycosyl hydrolase clan F (according to carbohydrate-active enzymes database (CAZY)) includes family 43 (GH43) and 62 (GH62). GH43 includes enzymes with beta-xylosidase (EC 3.2.1.37), beta-1,3-xylosidase (EC 3.2.1.-), alpha-L-arabinofuranosidase (EC 3.2.1.55), arabinanase (EC 3.2.1.99), xylanase (EC 3.2.1.8), endo-alpha-L-arabinanases (beta-xylanases) and galactan 1,3-beta-galactosidase (EC 3.2.1.145) activities. GH62 includes enzymes characterized as arabinofuranosidases (alpha-L-arabinofuranosidases; EC 3.2.1.55) that specifically cleave either alpha-1,2 or alpha-1,3-L-arabinofuranose side chains from xylans. GH43 are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. GH62 are also predicted to be inverting enzymes. A common structural feature of both, GH43 and GH62 enzymes, is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended substrate-binding surface across the face of the propeller. | ||
| pfam09258 | Glyco_transf_64 | 4.0e-69 | 521 | 750 | 232 | + Glycosyl transferase family 64 domain. Members of this family catalyze the transfer reaction of N-acetylglucosamine and N-acetylgalactosamine from the respective UDP-sugars to the non-reducing end of [glucuronic acid]beta 1-3[galactose]beta 1-O-naphthalenemethanol, an acceptor substrate analog of the natural common linker of various glycosylaminoglycans. They are also required for the biosynthesis of heparan-sulphate. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| GO:0016758 | transferase activity, transferring hexosyl groups |
| GO:0031227 | intrinsic to endoplasmic reticulum membrane |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CAB85556.1 | 0 | 48 | 768 | 40 | 764 | putative protein [Arabidopsis thaliana] |
| RefSeq | NP_196070.2 | 0 | 48 | 768 | 41 | 765 | glycosyltransferase family protein 47 [Arabidopsis thaliana] |
| RefSeq | XP_002262646.1 | 0 | 75 | 767 | 63 | 755 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002315348.1 | 0 | 20 | 768 | 21 | 847 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002532924.1 | 0 | 80 | 768 | 17 | 704 | transferase, transferring glycosyl groups, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1on8_B | 4e-24 | 513 | 752 | 22 | 270 | A Chain A, Pyrococcus Horikoshii Acylaminoacyl Peptidase (orthorhombic Crystal Form) |
| PDB | 1on8_A | 4e-24 | 513 | 752 | 22 | 270 | A Chain A, Pyrococcus Horikoshii Acylaminoacyl Peptidase (orthorhombic Crystal Form) |
| PDB | 1on6_B | 4e-24 | 513 | 752 | 22 | 270 | A Chain A, Pyrococcus Horikoshii Acylaminoacyl Peptidase (orthorhombic Crystal Form) |
| PDB | 1on6_A | 4e-24 | 513 | 752 | 22 | 270 | A Chain A, Pyrococcus Horikoshii Acylaminoacyl Peptidase (orthorhombic Crystal Form) |
| PDB | 1omz_B | 4e-24 | 513 | 752 | 22 | 270 | A Chain A, Pyrococcus Horikoshii Acylaminoacyl Peptidase (orthorhombic Crystal Form) |
