y
Basic Information | |
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Species | Glycine max |
Cazyme ID | Glyma10g38480.2 |
Family | AA3 |
Protein Properties | Length: 492 Molecular Weight: 53268.8 Isoelectric Point: 7.0638 |
Chromosome | Chromosome/Scaffold: 10 Start: 46271348 End: 46274078 |
Description | Glucose-methanol-choline (GMC) oxidoreductase family protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
AA3 | 41 | 456 | 0 |
KSAPQILTYDYIVIGGGTCGCPLAATLSQGARVLVLERRGSPYTNPEQINIKNFVNSLADISPSSFSQPFISRDGVLNSRARVLGGGSVVNAGFYSRASS TYIRDSGWNETLAKDSYKWVEEKVAFEPPMLQWQSAVKDGLLEVGVLPYSGFTFDHLYGTKVGGTIFDKEGNRHTAADLLEYADPKRISVYLHATVQKIL FKYNTEKRRPQAYGVIFKDALGVMHRAYLSTKGKNELILSAGAIGSPQLLLLSGIGHANHLEAHGIKVVLDQPLVGQGMADNPLNVLVVPSPVPVEASLV QTLGITKFGSFIEAASGLSLGHSWSERLQGIFEFVSNQSGQPSTFPPEAKESVAETVRSLANPILKGGVLLEKIIGPRSTGHLELINTNPNDNPSVTFNY FKGPEDLRKCVEGMKT |
Full Sequence |
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Protein Sequence Length: 492 Download |
MEIIQASNEG RQTSMGLVYE QFIWAFLVGC TFISTFVREA KSAPQILTYD YIVIGGGTCG 60 CPLAATLSQG ARVLVLERRG SPYTNPEQIN IKNFVNSLAD ISPSSFSQPF ISRDGVLNSR 120 ARVLGGGSVV NAGFYSRASS TYIRDSGWNE TLAKDSYKWV EEKVAFEPPM LQWQSAVKDG 180 LLEVGVLPYS GFTFDHLYGT KVGGTIFDKE GNRHTAADLL EYADPKRISV YLHATVQKIL 240 FKYNTEKRRP QAYGVIFKDA LGVMHRAYLS TKGKNELILS AGAIGSPQLL LLSGIGHANH 300 LEAHGIKVVL DQPLVGQGMA DNPLNVLVVP SPVPVEASLV QTLGITKFGS FIEAASGLSL 360 GHSWSERLQG IFEFVSNQSG QPSTFPPEAK ESVAETVRSL ANPILKGGVL LEKIIGPRST 420 GHLELINTNP NDNPSVTFNY FKGPEDLRKC VEGMKTIIDV INSSILKIPL PQHASPSSNR 480 LDVALASEPE A* 540 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PRK02106 | PRK02106 | 3.0e-5 | 48 | 83 | 38 | + choline dehydrogenase; Validated | ||
PRK02106 | PRK02106 | 8.0e-19 | 209 | 321 | 117 | + choline dehydrogenase; Validated | ||
COG2303 | BetA | 3.0e-27 | 47 | 467 | 471 | + Choline dehydrogenase and related flavoproteins [Amino acid transport and metabolism] | ||
PLN02785 | PLN02785 | 1.0e-173 | 34 | 463 | 435 | + Protein HOTHEAD |
Gene Ontology | |
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GO Term | Description |
GO:0016614 | oxidoreductase activity, acting on CH-OH group of donors |
GO:0050660 | flavin adenine dinucleotide binding |
GO:0055114 | oxidation-reduction process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
RefSeq | XP_002267807.1 | 0 | 35 | 463 | 33 | 450 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002267848.1 | 0 | 35 | 463 | 33 | 450 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002298074.1 | 0 | 15 | 463 | 1 | 460 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002509694.1 | 0 | 35 | 467 | 36 | 471 | glucose-methanol-choline (gmc) oxidoreductase, putative [Ricinus communis] |
RefSeq | XP_002510860.1 | 0 | 24 | 464 | 15 | 462 | glucose-methanol-choline (gmc) oxidoreductase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3red_L | 0 | 35 | 490 | 13 | 439 | A Chain A, 3.0 A Structure Of The Prunus Mume Hydroxynitrile Lyase Isozyme-1 |
PDB | 3red_K | 0 | 35 | 490 | 13 | 439 | A Chain A, 3.0 A Structure Of The Prunus Mume Hydroxynitrile Lyase Isozyme-1 |
PDB | 3red_J | 0 | 35 | 490 | 13 | 439 | A Chain A, 3.0 A Structure Of The Prunus Mume Hydroxynitrile Lyase Isozyme-1 |
PDB | 3red_I | 0 | 35 | 490 | 13 | 439 | A Chain A, 3.0 A Structure Of The Prunus Mume Hydroxynitrile Lyase Isozyme-1 |
PDB | 3red_H | 0 | 35 | 490 | 13 | 439 | A Chain A, 3.0 A Structure Of The Prunus Mume Hydroxynitrile Lyase Isozyme-1 |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
cutin biosynthesis | RXN-2121 | EC-1.1.1 | 18-hydroxyoleate dehydrogenase |
cutin biosynthesis | RXN-9802 | EC-1.1.1 | 16-hydroxypalmitate dehydrogenase |
suberin biosynthesis | RXN-2121 | EC-1.1.1 | 18-hydroxyoleate dehydrogenase |