| Basic Information | |
|---|---|
| Species | Glycine max |
| Cazyme ID | Glyma10g38670.2 |
| Family | GH29 |
| Protein Properties | Length: 488 Molecular Weight: 55541.1 Isoelectric Point: 7.86 |
| Chromosome | Chromosome/Scaffold: 10 Start: 46457469 End: 46465249 |
| Description | alpha-L-fucosidase 1 |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH29 | 43 | 342 | 0 |
| SQLKWQQREIIMFFHFGVNTFSDREWGTGQENPAIFNPTGLNTTQWATVAADAGVSLMILTAKHHDGFCLWPSKYTDHSVISSPWQGGKGDVVQDFVNAA TAQGIDVGVYLSPWDRHDPRYGNDLLYNQYYLAQLQELLKKYPNVREIWFDGAKGANAKNMTYYFSDWFSMVKELQSSINIFSDAGPDVRWVGDETGSAG YTCWSTINRTSLSIGSPDIIQYINTGDPKGTDWLPAECDVSIRKGWFWHKSESPKKLSELLDIYYNSVGRNCVLLLNVPPNTSGLITEVDANRLKEFRSA | |||
| Full Sequence |
|---|
| Protein Sequence Length: 488 Download |
| MVRLWCSSLS ITLLFQQLIR LCISWSVQTP TPPLPILPLP TYSQLKWQQR EIIMFFHFGV 60 NTFSDREWGT GQENPAIFNP TGLNTTQWAT VAADAGVSLM ILTAKHHDGF CLWPSKYTDH 120 SVISSPWQGG KGDVVQDFVN AATAQGIDVG VYLSPWDRHD PRYGNDLLYN QYYLAQLQEL 180 LKKYPNVREI WFDGAKGANA KNMTYYFSDW FSMVKELQSS INIFSDAGPD VRWVGDETGS 240 AGYTCWSTIN RTSLSIGSPD IIQYINTGDP KGTDWLPAEC DVSIRKGWFW HKSESPKKLS 300 ELLDIYYNSV GRNCVLLLNV PPNTSGLITE VDANRLKEFR SAIKTIFHQN LAEDCFVKVS 360 SQRGGFGPEK MLDSDHLWSY WAPRDDDDEK DHWVEIWAKE GRLRFNVVRI QEAIGLGQRI 420 KRHEIYVDGK LIIKATTVGY KRLHRLDGGE VHARGVRIRI RKARGVPLIS SIGLHYDPFW 480 HSKFTVS* 540 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam01120 | Alpha_L_fucos | 7.0e-26 | 54 | 339 | 320 | + Alpha-L-fucosidase. | ||
| smart00812 | Alpha_L_fucos | 1.0e-26 | 78 | 339 | 279 | + Alpha-L-fucosidase. O-Glycosyl hydrolases (EC 3.2.1.-) are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Because the fold of proteins is better conserved than their sequences, some of the families can be grouped in 'clans'. Family 29 encompasses alpha-L-fucosidases, which is a lysosomal enzyme responsible for hydrolyzing the alpha-1,6-linked fucose joined to the reducing-end N-acetylglucosamine of the carbohydrate moieties of glycoproteins. Deficiency of alpha-L-fucosidase results in the lysosomal storage disease fucosidosis. | ||
| COG3669 | COG3669 | 7.0e-57 | 44 | 474 | 446 | + Alpha-L-fucosidase [Carbohydrate transport and metabolism] | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004560 | alpha-L-fucosidase activity |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| RefSeq | XP_002270630.1 | 0 | 43 | 481 | 22 | 461 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002270674.1 | 0 | 31 | 479 | 7 | 458 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002318264.1 | 0 | 1 | 485 | 1 | 485 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002322431.1 | 0 | 1 | 481 | 1 | 482 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002510887.1 | 0 | 1 | 481 | 1 | 482 | alpha-l-fucosidase, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3eyp_B | 0 | 35 | 475 | 5 | 454 | A Chain A, Crystal Structure Of Putative Alpha-L-Fucosidase From Bacteroides Thetaiotaomicron |
| PDB | 3eyp_A | 0 | 35 | 475 | 5 | 454 | A Chain A, Crystal Structure Of Putative Alpha-L-Fucosidase From Bacteroides Thetaiotaomicron |
| PDB | 3ues_B | 0 | 40 | 470 | 19 | 471 | A Chain A, Crystal Structure Of Alpha-1,34-Fucosidase From Bifidobacterium Longum Subsp. Infantis Complexed With Deoxyfuconojirimycin |
| PDB | 3ues_A | 0 | 40 | 470 | 19 | 471 | A Chain A, Crystal Structure Of Alpha-1,34-Fucosidase From Bifidobacterium Longum Subsp. Infantis Complexed With Deoxyfuconojirimycin |
| PDB | 3mo4_B | 0 | 40 | 470 | 21 | 473 | A Chain A, The Crystal Structure Of An Alpha-(1-3,4)-Fucosidase From Bifidobacterium Longum Subsp. Infantis Atcc 15697 |
